RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP188	YML103C	RIO1	Q12196	484 aa	Known RBP	0.99	□□□□□ -2.25
NUP188	YML103C	RPB9	P27999	122 aa		0.99	□□□□□ -2.25
NUP188	YML103C	TCA17	P32613	152 aa		0.99	□□□□□ -2.25
NUP188	YML103C	YBR096W	P38256	230 aa		0.99	□□□□□ -2.25
NUP188	YML103C	HMF1	P40037	129 aa	Known RBP	0.99	□□□□□ -2.25
NUP188	YML103C	FMP32	P43557	207 aa		0.99	□□□□□ -2.25
NUP188	YML103C	LSM7	P53905	115 aa	Known RBP	0.99	□□□□□ -2.25
NUP188	YML103C	HPT1	Q04178	221 aa	Known RBP	0.99	□□□□□ -2.25
NUP188	YML103C	YLR030W	Q07967	263 aa		0.99	□□□□□ -2.25
NUP188	YML103C	YLR031W	Q07978	186 aa		0.99	□□□□□ -2.25
NUP188	YML103C	YLR036C	Q07986	203 aa		0.99	□□□□□ -2.25
NUP188	YML103C	YNG1	Q08465	219 aa		0.99	□□□□□ -2.25
NUP188	YML103C	RPL26A	P05743	127 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	SEC4	P07560	215 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	SCM4	P32564	187 aa		0.98	□□□□□ -2.25
NUP188	YML103C	MRPL28	P36527	147 aa		0.98	□□□□□ -2.25
NUP188	YML103C	FES1	P38260	290 aa		0.98	□□□□□ -2.25
NUP188	YML103C	YGP1	P38616	354 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	YER188W	P40103	239 aa		0.98	□□□□□ -2.25
NUP188	YML103C	CAT5	P41735	233 aa		0.98	□□□□□ -2.25
NUP188	YML103C	PFS2	P42841	465 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	TRM9	P49957	279 aa		0.98	□□□□□ -2.25
NUP188	YML103C	RPL26B	P53221	127 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	FCF1	Q05498	189 aa	Predicted RBP	0.98	□□□□□ -2.25
NUP188	YML103C	YOR376W	Q08900	122 aa		0.98	□□□□□ -2.25
NUP188	YML103C	USB1	Q12208	290 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	CDC28	P00546	298 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	TCP1	P12612	559 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	SNF6	P18888	332 aa		0.98	□□□□□ -2.25
NUP188	YML103C	MRPS28	P21771	286 aa		0.98	□□□□□ -2.25
NUP188	YML103C	SEC22	P22214	214 aa		0.98	□□□□□ -2.25
NUP188	YML103C	RFA3	P26755	122 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	TRR1	P29509	319 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	PTM1	P32857	523 aa		0.98	□□□□□ -2.25
NUP188	YML103C	CLB6	P32943	380 aa		0.98	□□□□□ -2.25
NUP188	YML103C	YKR032W	P36127	104 aa		0.98	□□□□□ -2.25
NUP188	YML103C	PDS1	P40316	373 aa	Predicted RBP	0.98	□□□□□ -2.25
NUP188	YML103C	XPT1	P47165	209 aa		0.98	□□□□□ -2.25
NUP188	YML103C	MMS2	P53152	137 aa		0.98	□□□□□ -2.25
NUP188	YML103C	GPM2	Q12008	311 aa		0.98	□□□□□ -2.25
NUP188	YML103C	YPR014C	Q6B0W2	109 aa		0.98	□□□□□ -2.25
NUP188	YML103C	RPS24A	P0CX31	135 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	RPS24B	P0CX32	135 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	CBF1	P17106	351 aa		0.98	□□□□□ -2.25
NUP188	YML103C	CKS1	P20486	150 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
NUP188	YML103C	MTW1	P39731	289 aa		0.98	□□□□□ -2.25
NUP188	YML103C	AST2	P39945	430 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	BMT5	P40493	336 aa		0.98	□□□□□ -2.25
NUP188	YML103C	YMR244W	Q04018	355 aa		0.98	□□□□□ -2.25
NUP188	YML103C	DYN3	Q04949	312 aa		0.98	□□□□□ -2.25
NUP188	YML103C	LOA1	Q06508	300 aa		0.98	□□□□□ -2.25
NUP188	YML103C	YLR050C	Q12155	161 aa	Known RBP	0.98	□□□□□ -2.25
NUP188	YML103C	GIS3	Q12418	502 aa		0.98	□□□□□ -2.25
NUP188	YML103C	NOT5	Q12514	560 aa	Predicted RBP	0.98	□□□□□ -2.25
NUP188	YML103C	PAN1	P32521	1480 aa		0.98	□□□□□ -2.25
NUP188	YML103C	FMT1	P32785	401 aa		0.98	□□□□□ -2.25
NUP188	YML103C	SNC2	P33328	115 aa		0.98	□□□□□ -2.25
NUP188	YML103C	SYF2	P53277	215 aa	Predicted RBP	0.98	□□□□□ -2.25
NUP188	YML103C	COG5	P53951	403 aa		0.98	□□□□□ -2.25
NUP188	YML103C	YPL039W	Q03080	316 aa		0.98	□□□□□ -2.25
NUP188	YML103C	SNZ1	Q03148	297 aa		0.98	□□□□□ -2.25
NUP188	YML103C	URA5	P13298	226 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	EHD3	P28817	500 aa		0.97	□□□□□ -2.25
NUP188	YML103C	YBR063C	P38083	404 aa		0.97	□□□□□ -2.25
NUP188	YML103C	YHR125W	P38831	101 aa		0.97	□□□□□ -2.25
NUP188	YML103C	POG1	P40473	351 aa		0.97	□□□□□ -2.25
NUP188	YML103C	DSK2	P48510	373 aa		0.97	□□□□□ -2.25
NUP188	YML103C	YOR283W	Q12040	230 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	FLO11	P08640	1367 aa		0.97	□□□□□ -2.25
NUP188	YML103C	MSW1	P04803	379 aa		0.97	□□□□□ -2.25
NUP188	YML103C	DBF2	P22204	572 aa		0.97	□□□□□ -2.25
NUP188	YML103C	SEC14	P24280	304 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	YCR090C	P25654	182 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	ECM33	P38248	429 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	SVP26	P38869	228 aa		0.97	□□□□□ -2.25
NUP188	YML103C	YGL088W	P53151	121 aa		0.97	□□□□□ -2.25
NUP188	YML103C	EFM5	P53200	248 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	ERV29	P53337	310 aa		0.97	□□□□□ -2.25
NUP188	YML103C	SSU72	P53538	206 aa	Predicted RBP	0.97	□□□□□ -2.25
NUP188	YML103C	FEX1	Q08913	375 aa		0.97	□□□□□ -2.25
NUP188	YML103C	FEX2	Q08991	375 aa		0.97	□□□□□ -2.25
NUP188	YML103C	AKR2	Q12013	749 aa		0.97	□□□□□ -2.25
NUP188	YML103C	BBP1	Q12365	385 aa		0.97	□□□□□ -2.25
NUP188	YML103C	SIR4	P11978	1358 aa		0.97	□□□□□ -2.25
NUP188	YML103C	Q0255	P03881	472 aa		0.97	□□□□□ -2.25
NUP188	YML103C	DPM1	P14020	267 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	FBA1	P14540	359 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	YCR025C	P25352	136 aa		0.97	□□□□□ -2.25
NUP188	YML103C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	not detected
NUP188	YML103C	SPO73	P40031	143 aa		0.97	□□□□□ -2.25
NUP188	YML103C	PGU1	P47180	361 aa		0.97	□□□□□ -2.25
NUP188	YML103C	YGL159W	P53110	370 aa		0.97	□□□□□ -2.25
NUP188	YML103C	EMI1	Q04406	187 aa		0.97	□□□□□ -2.25
NUP188	YML103C	YMR315W	Q04869	349 aa	Known RBP	0.97	□□□□□ -2.25
NUP188	YML103C	YLR053C	Q12026	108 aa		0.97	□□□□□ -2.25
NUP188	YML103C	GEP5	Q12393	293 aa		0.97	□□□□□ -2.25
NUP188	YML103C	COX5A	P00424	153 aa		0.97	□□□□□ -2.25
NUP188	YML103C	ARG80	P07249	177 aa		0.97	□□□□□ -2.25
NUP188	YML103C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 95.3 ms