RNA–Protein interactions for RNA: YML015C

TAF11, Transcript of TFIID subunit (40 kDa), yeast

Gene TAF11, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF11	YML015C	RTC4	P53850	401 aa		4.16	□□□□□ -1.74
TAF11	YML015C	YPL039W	Q03080	316 aa		4.16	□□□□□ -1.74
TAF11	YML015C	YMR166C	Q03829	368 aa		4.16	□□□□□ -1.74
TAF11	YML015C	ARO80	Q04052	950 aa		4.16	□□□□□ -1.74
TAF11	YML015C	YDR222W	Q04925	415 aa		4.16	□□□□□ -1.74
TAF11	YML015C	JIP3	O13555	125 aa		4.15	□□□□□ -1.75
TAF11	YML015C	YAK1	P14680	807 aa		4.15	□□□□□ -1.75
TAF11	YML015C	CSG2	P35206	410 aa		4.15	□□□□□ -1.75
TAF11	YML015C	ILM1	P47155	203 aa		4.15	□□□□□ -1.75
TAF11	YML015C	TVP15	Q03860	143 aa		4.15	□□□□□ -1.75
TAF11	YML015C	COQ10	Q08058	207 aa		4.15	□□□□□ -1.75
TAF11	YML015C	RHO1	P06780	209 aa	Known RBP	4.14	□□□□□ -1.75
TAF11	YML015C	GOS1	P38736	223 aa		4.14	□□□□□ -1.75
TAF11	YML015C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
TAF11	YML015C	TIF34	P40217	347 aa	Known RBP	4.14	□□□□□ -1.75
TAF11	YML015C	AAH1	P53909	347 aa		4.14	□□□□□ -1.75
TAF11	YML015C	TLG1	Q03322	224 aa		4.14	□□□□□ -1.75
TAF11	YML015C	IES3	Q12345	250 aa		4.14	□□□□□ -1.75
TAF11	YML015C	SNU23	Q12368	194 aa	Predicted RBP	4.14	□□□□□ -1.75
TAF11	YML015C	YIL046W-A	Q3E7Z4	54 aa		4.14	□□□□□ -1.75
TAF11	YML015C	DDP1	Q99321	188 aa	Known RBP	4.14	□□□□□ -1.75
TAF11	YML015C	YBR056W-A	I2HB52	66 aa		4.13	□□□□□ -1.75
TAF11	YML015C	ECM13	P38195	257 aa		4.13	□□□□□ -1.75
TAF11	YML015C	FZO1	P38297	855 aa		4.13	□□□□□ -1.75
TAF11	YML015C	THO1	P40040	218 aa	Known RBP	4.13	□□□□□ -1.75
TAF11	YML015C	RHO3	Q00245	231 aa	Known RBP	4.13	□□□□□ -1.75
TAF11	YML015C	SPO77	Q06134	477 aa		4.13	□□□□□ -1.75
TAF11	YML015C	YPR147C	Q06522	304 aa	Known RBP	4.13	□□□□□ -1.75
TAF11	YML015C	RRS1	Q08746	203 aa	Known RBP	4.13	□□□□□ -1.75
TAF11	YML015C	YKR104W	P0CE69	306 aa		4.12	□□□□□ -1.75
TAF11	YML015C	MRPL25	P23369	157 aa		4.12	□□□□□ -1.75
TAF11	YML015C	YCR102C	P25608	368 aa		4.12	□□□□□ -1.75
TAF11	YML015C	SGE1	P33335	543 aa		4.12	□□□□□ -1.75
TAF11	YML015C	SNZ3	P43545	298 aa		4.12	□□□□□ -1.75
TAF11	YML015C	MZM1	Q03429	123 aa	Predicted RBP	4.12	□□□□□ -1.75
TAF11	YML015C	YPL150W	Q12152	901 aa		4.12	□□□□□ -1.75
TAF11	YML015C	PRR2	Q12310	699 aa		4.12	□□□□□ -1.75
TAF11	YML015C	GIS3	Q12418	502 aa		4.12	□□□□□ -1.75
TAF11	YML015C	YDL012C	Q12489	107 aa		4.12	□□□□□ -1.75
TAF11	YML015C	YBL112C	Q3E7Y4	105 aa		4.12	□□□□□ -1.75
TAF11	YML015C	YOL163W	P0CF20	169 aa		4.11	□□□□□ -1.75
TAF11	YML015C	DOA4	P32571	926 aa		4.11	□□□□□ -1.75
TAF11	YML015C	TRM7	P38238	310 aa	Known RBP	4.11	□□□□□ -1.75
TAF11	YML015C	YRB1	P41920	201 aa	Known RBP	4.11	□□□□□ -1.75
TAF11	YML015C	YFR045W	P43617	309 aa		4.11	□□□□□ -1.75
TAF11	YML015C	RPC17	P47076	161 aa		4.11	□□□□□ -1.75
TAF11	YML015C	SNZ2	P53824	298 aa		4.11	□□□□□ -1.75
TAF11	YML015C	SPG4	Q04438	115 aa		4.11	□□□□□ -1.75
TAF11	YML015C	GTO3	Q04806	366 aa		4.11	□□□□□ -1.75
TAF11	YML015C	ABP140	Q08641	628 aa	Known RBP	4.11	□□□□□ -1.75
TAF11	YML015C	RPL24B	P24000	155 aa	Known RBP	4.1	□□□□□ -1.75
TAF11	YML015C	PPA2	P28239	310 aa		4.1	□□□□□ -1.75
TAF11	YML015C	YKT6	P36015	200 aa	Known RBP	4.1	□□□□□ -1.75
TAF11	YML015C	YIR035C	P40579	254 aa		4.1	□□□□□ -1.75
TAF11	YML015C	CPR7	P47103	393 aa		4.1	□□□□□ -1.75
TAF11	YML015C	RSM27	P53305	110 aa		4.1	□□□□□ -1.75
TAF11	YML015C	TIM8	P57744	87 aa		4.1	□□□□□ -1.75
TAF11	YML015C	FAR8	Q05040	523 aa		4.1	□□□□□ -1.75
TAF11	YML015C	YOL019W	Q08157	551 aa		4.1	□□□□□ -1.75
TAF11	YML015C	RRP40	Q08285	240 aa	Known RBP	4.1	□□□□□ -1.75
TAF11	YML015C	YPS3	Q12303	508 aa		4.1	□□□□□ -1.75
TAF11	YML015C	RPB4	P20433	221 aa	Predicted RBP	4.09	□□□□□ -1.75
TAF11	YML015C	AST1	P35183	429 aa		4.09	□□□□□ -1.75
TAF11	YML015C	VPS21	P36017	210 aa	Known RBP	4.09	□□□□□ -1.75
TAF11	YML015C	SUR2	P38992	349 aa		4.09	□□□□□ -1.75
TAF11	YML015C	YIL059C	P40520	121 aa		4.09	□□□□□ -1.75
TAF11	YML015C	YIL001W	P40560	513 aa		4.09	□□□□□ -1.75
TAF11	YML015C	ECO1	P43605	281 aa		4.09	□□□□□ -1.75
TAF11	YML015C	YJL028W	P47062	111 aa		4.09	□□□□□ -1.75
TAF11	YML015C	NIF3	P53081	288 aa		4.09	□□□□□ -1.75
TAF11	YML015C	YGL034C	P53186	121 aa		4.09	□□□□□ -1.75
TAF11	YML015C	DCR2	Q05924	578 aa		4.09	□□□□□ -1.75
TAF11	YML015C	GGA1	Q06336	557 aa		4.09	□□□□□ -1.75
TAF11	YML015C	CLP1	Q08685	445 aa	Predicted RBP	4.09	□□□□□ -1.75
TAF11	YML015C	NHP6B	P11633	99 aa	Known RBP	4.08	□□□□□ -1.76
TAF11	YML015C	RPC19	P28000	142 aa	Known RBP	4.08	□□□□□ -1.76
TAF11	YML015C	VMA6	P32366	345 aa	Known RBP	4.08	□□□□□ -1.76
TAF11	YML015C	YKL075C	P36083	450 aa		4.08	□□□□□ -1.76
TAF11	YML015C	PRY2	P36110	329 aa		4.08	□□□□□ -1.76
TAF11	YML015C	ECM4	P36156	370 aa		4.08	□□□□□ -1.76
TAF11	YML015C	MIC12	P38341	106 aa		4.08	□□□□□ -1.76
TAF11	YML015C	ALG9	P53868	555 aa	Known RBP	4.08	□□□□□ -1.76
TAF11	YML015C	YPR063C	Q12160	140 aa		4.08	□□□□□ -1.76
TAF11	YML015C	YEL009C-A	A0A023PZF2	135 aa		4.07	□□□□□ -1.76
TAF11	YML015C	THP2	O13539	261 aa	Known RBP	4.07	□□□□□ -1.76
TAF11	YML015C	PHO13	P19881	312 aa		4.07	□□□□□ -1.76
TAF11	YML015C	CDC10	P25342	322 aa	Known RBP	4.07	□□□□□ -1.76
TAF11	YML015C	YHR127W	P38833	243 aa	Known RBP	4.07	□□□□□ -1.76
TAF11	YML015C	OST3	P48439	350 aa		4.07	□□□□□ -1.76
TAF11	YML015C	MRH4	P53166	561 aa		4.07	□□□□□ -1.76
TAF11	YML015C	SPG3	Q04398	127 aa	Predicted RBP	4.07	□□□□□ -1.76
TAF11	YML015C	EMI1	Q04406	187 aa		4.07	□□□□□ -1.76
TAF11	YML015C	YLR126C	Q12288	251 aa		4.07	□□□□□ -1.76
TAF11	YML015C	TIM22	Q12328	207 aa		4.07	□□□□□ -1.76
TAF11	YML015C	YBL008W-A	Q3E821	79 aa		4.07	□□□□□ -1.76
TAF11	YML015C	ISD11	Q6Q560	94 aa		4.07	□□□□□ -1.76
TAF11	YML015C	CDC8	P00572	216 aa		4.06	□□□□□ -1.76
TAF11	YML015C	PBN1	P25580	416 aa		4.06	□□□□□ -1.76
TAF11	YML015C	BMH1	P29311	267 aa	Known RBP	4.06	□□□□□ -1.76
TAF11	YML015C	AGA2	P32781	87 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms