RNA–Protein interactions for RNA: YLL029W

FRA1, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA1, Length 2,250 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA1	YLL029W	RPL13A	Q12690	199 aa	Predicted RBP	7.26	□□□□□ -1.25
FRA1	YLL029W	HAP3	P13434	144 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	EMP24	P32803	203 aa	Known RBP	7.25	□□□□□ -1.25
FRA1	YLL029W	TKL2	P33315	681 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	SKN1	P33336	771 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	LSM2	P38203	95 aa	Known RBP	7.25	□□□□□ -1.25
FRA1	YLL029W	TRS20	P38334	175 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	YMR144W	P40214	342 aa	Known RBP	7.25	□□□□□ -1.25
FRA1	YLL029W	YNR040W	P53736	256 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	ARC18	Q05933	178 aa	Known RBP	7.25	□□□□□ -1.25
FRA1	YLL029W	BGL2	P15703	313 aa	Known RBP	7.25	□□□□□ -1.25
FRA1	YLL029W	RPB5	P20434	215 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.25	□□□□□ -1.25	not detected
FRA1	YLL029W	YBR096W	P38256	230 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	MET30	P39014	640 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	MIT1	P40002	666 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	PAN6	P40459	309 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	MNN5	P46982	586 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	YGR168C	P53293	376 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	YML018C	Q03730	393 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	ERP3	Q12403	225 aa		7.25	□□□□□ -1.25
FRA1	YLL029W	SPO12	P17123	173 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	REC114	P32841	428 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	YET1	P35723	206 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	FIS1	P40515	155 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	IRC18	P47056	224 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	TAH1	P25638	111 aa	Predicted RBP	7.24	□□□□□ -1.25
FRA1	YLL029W	MET22	P32179	357 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	TIF34	P40217	347 aa	Known RBP	7.24	□□□□□ -1.25
FRA1	YLL029W	EMG1	Q06287	252 aa	Known RBP	7.24	□□□□□ -1.25
FRA1	YLL029W	GPI11	Q06636	219 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	AIM39	Q08223	395 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	PEX27	Q08580	376 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	Q0142	Q9ZZW4	58 aa		7.24	□□□□□ -1.25
FRA1	YLL029W	FLO1	P32768	1537 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	HIS1	P00498	297 aa	Known RBP	7.23	□□□□□ -1.25
FRA1	YLL029W	COX4	P04037	155 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	YLL053C	P0CD98	152 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	OAC1	P32332	324 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	FMT1	P32785	401 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	LAG1	P38703	411 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	LYS1	P38998	373 aa	RIP-Chip data	7.23	□□□□□ -1.25	not detected
FRA1	YLL029W	POP1	P41812	875 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	YFL040W	P43562	540 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	AVT1	P47082	602 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	SRT1	Q03175	343 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	GRH1	Q04410	372 aa	Known RBP	7.23	□□□□□ -1.25
FRA1	YLL029W	YOR338W	Q99326	363 aa		7.23	□□□□□ -1.25
FRA1	YLL029W	MUD1	P32605	298 aa	Known RBP	7.22	□□□□□ -1.25
FRA1	YLL029W	RRP4	P38792	359 aa	Known RBP	7.22	□□□□□ -1.25
FRA1	YLL029W	TAM41	P53230	385 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	GPI15	P53961	229 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	YPR114W	Q06107	315 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	TEN1	Q07921	160 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	YLR149C	Q99296	730 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	PHO85	P17157	305 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	YNR048W	P53740	393 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	YNL165W	P53891	406 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	COQ9	Q05779	260 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	SNT309	Q06091	175 aa	Predicted RBP	7.22	□□□□□ -1.25
FRA1	YLL029W	LAS17	Q12446	633 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	PCC1	Q3E833	88 aa		7.22	□□□□□ -1.25
FRA1	YLL029W	FLO11	P08640	1367 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	YLR415C	O13578	112 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	MBR1	P23493	339 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	SRY1	P36007	326 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	YBR090C	P38253	122 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	RPL14B	P38754	138 aa	Known RBP	7.21	□□□□□ -1.25
FRA1	YLL029W	RPS10B	P46784	105 aa	Known RBP	7.21	□□□□□ -1.25
FRA1	YLL029W	LCB3	P47013	409 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	COQ5	P49017	307 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	SAY1	P53324	424 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	STP3	Q05937	343 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	ENB1	Q08299	606 aa		7.21	□□□□□ -1.25
FRA1	YLL029W	PRE2	P30656	287 aa	Known RBP	7.21	□□□□□ -1.26
FRA1	YLL029W	BCS1	P32839	456 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	DCW1	P36091	449 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	YEL075C	P39972	122 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	KTR5	P53966	522 aa	Predicted RBP	7.21	□□□□□ -1.26
FRA1	YLL029W	NUP53	Q03790	475 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	ECI1	Q05871	280 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	FRE7	Q12333	620 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	ATG5	Q12380	294 aa		7.21	□□□□□ -1.26
FRA1	YLL029W	FEN2	P25621	512 aa	Known RBP	7.2	□□□□□ -1.26
FRA1	YLL029W	YSC83	P32792	385 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	NSG1	P38837	291 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	YIL152W	P40455	235 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	YIR007W	P40566	764 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	CLD1	P53264	445 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	COF1	Q03048	143 aa	Known RBP	7.2	□□□□□ -1.26
FRA1	YLL029W	DOT1	Q04089	582 aa	Known RBP	7.2	□□□□□ -1.26
FRA1	YLL029W	RDL2	Q08742	149 aa	Known RBP	7.2	□□□□□ -1.26
FRA1	YLL029W	MCP1	Q12106	302 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	PEX11	Q12462	236 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	YDR034W-B	Q6Q5X2	51 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	TOR1	P35169	2470 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	YOL163W	P0CF20	169 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	HYP2	P23301	157 aa	Known RBP	7.2	□□□□□ -1.26
FRA1	YLL029W	NUP2	P32499	720 aa		7.2	□□□□□ -1.26
FRA1	YLL029W	RTG1	P32607	177 aa		7.2	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 109.9 ms