RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W DEG1P31115 442 aaKnown RBP4.52□□□□□ -1.69
CBF1YJR060W PAU2P32612 120 aa4.52□□□□□ -1.69
CBF1YJR060W ARC40P38328 384 aaKnown RBP4.52□□□□□ -1.69
CBF1YJR060W LAG1P38703 411 aa4.52□□□□□ -1.69
CBF1YJR060W TIR3P40552 269 aa4.52□□□□□ -1.69
CBF1YJR060W YGL204CP53089 101 aa4.52□□□□□ -1.69
CBF1YJR060W YIP5P53108 310 aa4.52□□□□□ -1.69
CBF1YJR060W CRZ1P53968 678 aa4.52□□□□□ -1.69
CBF1YJR060W TDA1Q03533 586 aa4.52□□□□□ -1.69
CBF1YJR060W GPI17Q04080 534 aa4.52□□□□□ -1.69
CBF1YJR060W RFU1Q08003 200 aa4.52□□□□□ -1.69
CBF1YJR060W SRL2Q12020 392 aa4.52□□□□□ -1.69
CBF1YJR060W YEL009C-AA0A023PZF2 135 aa4.51□□□□□ -1.69
CBF1YJR060W RAD52P06778 471 aaKnown RBP4.51□□□□□ -1.69
CBF1YJR060W ATP10P18496 279 aa4.51□□□□□ -1.69
CBF1YJR060W RSM22P36056 628 aa4.51□□□□□ -1.69
CBF1YJR060W SHE2P36068 246 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
CBF1YJR060W SDS24P38314 527 aa4.51□□□□□ -1.69
CBF1YJR060W PCL6P40038 420 aa4.51□□□□□ -1.69
CBF1YJR060W ERJ5P43613 295 aaPredicted RBP4.51□□□□□ -1.69
CBF1YJR060W ECM27P47144 725 aa4.51□□□□□ -1.69
CBF1YJR060W PKP2P53170 491 aa4.51□□□□□ -1.69
CBF1YJR060W HHT1P61830 136 aa4.51□□□□□ -1.69
CBF1YJR060W YDC1Q02896 317 aa4.51□□□□□ -1.69
CBF1YJR060W SRL4Q03085 281 aa4.51□□□□□ -1.69
CBF1YJR060W YMR279CQ03263 540 aa4.51□□□□□ -1.69
CBF1YJR060W GMC1Q04399 608 aa4.51□□□□□ -1.69
CBF1YJR060W MGR3Q04472 501 aa4.51□□□□□ -1.69
CBF1YJR060W YPR098CQ06089 161 aa4.51□□□□□ -1.69
CBF1YJR060W PEX30Q06169 523 aa4.51□□□□□ -1.69
CBF1YJR060W SSK1Q07084 712 aa4.51□□□□□ -1.69
CBF1YJR060W RRS1Q08746 203 aaKnown RBP4.51□□□□□ -1.69
CBF1YJR060W RNH203Q12338 110 aa4.51□□□□□ -1.69
CBF1YJR060W YLR099W-AQ3E798 87 aa4.51□□□□□ -1.69
CBF1YJR060W URA2P07259 2214 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W ADK1P07170 222 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W MATALPHA1P0CY06 175 aa4.5□□□□□ -1.69
CBF1YJR060W HMLALPHA1P0CY07 175 aa4.5□□□□□ -1.69
CBF1YJR060W RPL30P14120 105 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W RPL24BP24000 155 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W ARO7P32178 256 aa4.5□□□□□ -1.69
CBF1YJR060W GLC7P32598 312 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W REC114P32841 428 aa4.5□□□□□ -1.69
CBF1YJR060W SFK1P35735 353 aa4.5□□□□□ -1.69
CBF1YJR060W MCH2P36032 473 aa4.5□□□□□ -1.69
CBF1YJR060W SSH1P38353 490 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W SMB1P40018 196 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W JLP2P40206 208 aa4.5□□□□□ -1.69
CBF1YJR060W VHS2P40463 436 aa4.5□□□□□ -1.69
CBF1YJR060W FLX1P40464 311 aa4.5□□□□□ -1.69
CBF1YJR060W YIL029CP40538 142 aa4.5□□□□□ -1.69
CBF1YJR060W YJL218WP40892 196 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W ATG18P43601 500 aa4.5□□□□□ -1.69
CBF1YJR060W BNA6P43619 295 aa4.5□□□□□ -1.69
CBF1YJR060W CIN2P46670 268 aa4.5□□□□□ -1.69
CBF1YJR060W SCW4P53334 386 aaKnown RBP4.5□□□□□ -1.69
CBF1YJR060W OCA2P53949 197 aa4.5□□□□□ -1.69
CBF1YJR060W SED1Q01589 338 aa4.5□□□□□ -1.69
CBF1YJR060W YMR252CQ04814 134 aa4.5□□□□□ -1.69
CBF1YJR060W FMP42Q04991 504 aa4.5□□□□□ -1.69
CBF1YJR060W SUS1Q6WNK7 96 aa4.5□□□□□ -1.69
CBF1YJR060W HNM1P19807 563 aa4.49□□□□□ -1.69
CBF1YJR060W YCL042WP25572 119 aa4.49□□□□□ -1.69
CBF1YJR060W DAL80P26343 269 aa4.49□□□□□ -1.69
CBF1YJR060W MNS1P32906 549 aa4.49□□□□□ -1.69
CBF1YJR060W SNC2P33328 115 aa4.49□□□□□ -1.69
CBF1YJR060W ADH5P38113 351 aaKnown RBP4.49□□□□□ -1.69
CBF1YJR060W GPX2P38143 162 aa4.49□□□□□ -1.69
CBF1YJR060W YER121WP40076 114 aa4.49□□□□□ -1.69
CBF1YJR060W EGT2P42835 1041 aa4.49□□□□□ -1.69
CBF1YJR060W YGL159WP53110 370 aa4.49□□□□□ -1.69
CBF1YJR060W YNL234WP53857 426 aa4.49□□□□□ -1.69
CBF1YJR060W YNL046WP53956 172 aa4.49□□□□□ -1.69
CBF1YJR060W YPL067CQ02754 198 aa4.49□□□□□ -1.69
CBF1YJR060W GPN3Q06543 272 aa4.49□□□□□ -1.69
CBF1YJR060W POS5Q06892 414 aa4.49□□□□□ -1.69
CBF1YJR060W MRX9Q07349 420 aaKnown RBP4.49□□□□□ -1.69
CBF1YJR060W TFB5Q3E7C1 72 aaPredicted RBP4.49□□□□□ -1.69
CBF1YJR060W FSH3Q99369 266 aa4.49□□□□□ -1.69
CBF1YJR060W COX5BP00425 151 aa4.48□□□□□ -1.69
CBF1YJR060W SGA1P08019 549 aa4.48□□□□□ -1.69
CBF1YJR060W DPB2P24482 689 aaPredicted RBP4.48□□□□□ -1.69
CBF1YJR060W PCL1P24867 279 aa4.48□□□□□ -1.69
CBF1YJR060W RPL5P26321 297 aaKnown RBP4.48□□□□□ -1.69
CBF1YJR060W TMA19P35691 167 aaKnown RBP4.48□□□□□ -1.69
CBF1YJR060W RCN1P36054 211 aa4.48□□□□□ -1.69
CBF1YJR060W YHL044WP38727 235 aa4.48□□□□□ -1.69
CBF1YJR060W GAT2P40209 560 aa4.48□□□□□ -1.69
CBF1YJR060W OST1P41543 476 aaKnown RBP4.48□□□□□ -1.69
CBF1YJR060W AVT4P50944 713 aa4.48□□□□□ -1.69
CBF1YJR060W DOC1P53068 250 aa4.48□□□□□ -1.69
CBF1YJR060W YKR005CQ02203 525 aa4.48□□□□□ -1.69
CBF1YJR060W CAC2Q04199 468 aa4.48□□□□□ -1.69
CBF1YJR060W GAT3Q07928 141 aa4.48□□□□□ -1.69
CBF1YJR060W ORT1Q12375 292 aa4.48□□□□□ -1.69
CBF1YJR060W SAG1P20840 650 aa4.47□□□□□ -1.69
CBF1YJR060W ZUO1P32527 433 aaKnown RBP4.47□□□□□ -1.69
CBF1YJR060W TCA17P32613 152 aa4.47□□□□□ -1.69
CBF1YJR060W YKL187CP34231 750 aa4.47□□□□□ -1.69
CBF1YJR060W ZRT3P34240 503 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms