RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W PHO88P38264 188 aaPredicted RBP2.28□□□□□ -2.04
IMP3YHR148W LSM4P40070 187 aaKnown RBP2.28□□□□□ -2.04
IMP3YHR148W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
IMP3YHR148W BOL1Q3E793 110 aa2.28□□□□□ -2.04
IMP3YHR148W SPT3P06844 337 aa2.27□□□□□ -2.05
IMP3YHR148W SRY1P36007 326 aa2.27□□□□□ -2.05
IMP3YHR148W YIL001WP40560 513 aa2.27□□□□□ -2.05
IMP3YHR148W MIC12P38341 106 aa2.26□□□□□ -2.05
IMP3YHR148W URA8P38627 578 aaPredicted RBP2.26□□□□□ -2.05
IMP3YHR148W PRM10P42946 383 aa2.26□□□□□ -2.05
IMP3YHR148W CYT2Q00873 224 aa2.26□□□□□ -2.05
IMP3YHR148W ABF2Q02486 183 aa2.26□□□□□ -2.05
IMP3YHR148W TRM12Q04235 462 aa2.26□□□□□ -2.05
IMP3YHR148W SSQ1Q05931 657 aaPredicted RBP2.26□□□□□ -2.05
IMP3YHR148W THP2O13539 261 aaKnown RBP2.25□□□□□ -2.05
IMP3YHR148W ERV15P38312 142 aa2.25□□□□□ -2.05
IMP3YHR148W YHR022CP38763 256 aa2.25□□□□□ -2.05
IMP3YHR148W RTR1P40084 226 aaPredicted RBP2.25□□□□□ -2.05
IMP3YHR148W YFR054CP43622 192 aa2.25□□□□□ -2.05
IMP3YHR148W CYR1P08678 2026 aaKnown RBP2.25□□□□□ -2.05
IMP3YHR148W CDC8P00572 216 aa2.24□□□□□ -2.05
IMP3YHR148W YPR170W-BP0C5R9 85 aa2.24□□□□□ -2.05
IMP3YHR148W URA6P15700 204 aa2.24□□□□□ -2.05
IMP3YHR148W VMA6P32366 345 aaKnown RBP2.24□□□□□ -2.05
IMP3YHR148W RTC3P38804 111 aaPredicted RBP2.24□□□□□ -2.05
IMP3YHR148W IRC22P40006 225 aa2.24□□□□□ -2.05
IMP3YHR148W COX15P40086 486 aa2.24□□□□□ -2.05
IMP3YHR148W BMT5P40493 336 aa2.24□□□□□ -2.05
IMP3YHR148W RSM25P40496 264 aa2.24□□□□□ -2.05
IMP3YHR148W YKE4P40544 346 aa2.24□□□□□ -2.05
IMP3YHR148W ALG13P53178 202 aa2.24□□□□□ -2.05
IMP3YHR148W CDC123Q05791 360 aa2.24□□□□□ -2.05
IMP3YHR148W PSF1Q12488 208 aa2.24□□□□□ -2.05
IMP3YHR148W DDI2P0CH63 225 aa2.23□□□□□ -2.05
IMP3YHR148W DDI3P0CH64 225 aa2.23□□□□□ -2.05
IMP3YHR148W YMR31P19955 123 aa2.23□□□□□ -2.05
IMP3YHR148W PRE6P40303 254 aaKnown RBP2.23□□□□□ -2.05
IMP3YHR148W PEP8P40335 379 aa2.23□□□□□ -2.05
IMP3YHR148W OTU1P43558 301 aa2.23□□□□□ -2.05
IMP3YHR148W MIC26P50087 233 aa2.23□□□□□ -2.05
IMP3YHR148W ERG25P53045 309 aa2.23□□□□□ -2.05
IMP3YHR148W YNR062CP53748 327 aa2.23□□□□□ -2.05
IMP3YHR148W YNL010WP53981 241 aaKnown RBP2.23□□□□□ -2.05
IMP3YHR148W SPG3Q04398 127 aaPredicted RBP2.23□□□□□ -2.05
IMP3YHR148W USB1Q12208 290 aaKnown RBP2.23□□□□□ -2.05
IMP3YHR148W DRS2P39524 1355 aa2.23□□□□□ -2.05
IMP3YHR148W CDC28P00546 298 aaKnown RBP2.22□□□□□ -2.05
IMP3YHR148W CDC7P06243 507 aa2.22□□□□□ -2.05
IMP3YHR148W RPL24BP24000 155 aaKnown RBP2.22□□□□□ -2.05
IMP3YHR148W BMH2P34730 273 aaKnown RBP2.22□□□□□ -2.05
IMP3YHR148W DID2P69771 204 aa2.22□□□□□ -2.05
IMP3YHR148W DOG2P38773 246 aa2.21□□□□□ -2.06
IMP3YHR148W FYV6P53913 173 aa2.21□□□□□ -2.06
IMP3YHR148W YMD8Q03697 442 aa2.21□□□□□ -2.06
IMP3YHR148W LPP1Q04396 274 aa2.21□□□□□ -2.06
IMP3YHR148W YKL183C-AQ3E765 70 aa2.21□□□□□ -2.06
IMP3YHR148W PET9P18239 318 aaKnown RBP2.2□□□□□ -2.06
IMP3YHR148W DBF2P22204 572 aa2.2□□□□□ -2.06
IMP3YHR148W PPA2P28239 310 aa2.2□□□□□ -2.06
IMP3YHR148W BRR6P53062 197 aa2.2□□□□□ -2.06
IMP3YHR148W LSO2Q3E772 92 aaKnown RBP2.2□□□□□ -2.06
IMP3YHR148W SEY1Q99287 776 aa2.2□□□□□ -2.06
IMP3YHR148W REP2P03872 296 aa2.19□□□□□ -2.06
IMP3YHR148W MEI4P29467 408 aa2.19□□□□□ -2.06
IMP3YHR148W DSE2P38844 325 aa2.19□□□□□ -2.06
IMP3YHR148W RPL33BP41056 107 aaKnown RBP2.19□□□□□ -2.06
IMP3YHR148W MDH2P22133 377 aa2.18□□□□□ -2.06
IMP3YHR148W SSO1P32867 290 aa2.18□□□□□ -2.06
IMP3YHR148W ERG28P40030 148 aa2.18□□□□□ -2.06
IMP3YHR148W AGE2P40529 298 aa2.18□□□□□ -2.06
IMP3YHR148W AIF1P52923 378 aa2.18□□□□□ -2.06
IMP3YHR148W DCN1Q12395 269 aa2.18□□□□□ -2.06
IMP3YHR148W ARG80P07249 177 aa2.17□□□□□ -2.06
IMP3YHR148W ATG22P25568 528 aa2.17□□□□□ -2.06
IMP3YHR148W PBN1P25580 416 aa2.17□□□□□ -2.06
IMP3YHR148W POP4P38336 279 aa2.17□□□□□ -2.06
IMP3YHR148W SVP26P38869 228 aa2.17□□□□□ -2.06
IMP3YHR148W BXI1P48558 297 aa2.17□□□□□ -2.06
IMP3YHR148W NUP57P48837 541 aa2.17□□□□□ -2.06
IMP3YHR148W YML108WQ03759 105 aa2.17□□□□□ -2.06
IMP3YHR148W YDR248CQ03786 193 aa2.17□□□□□ -2.06
IMP3YHR148W UBR2Q07963 1872 aa2.16□□□□□ -2.06
IMP3YHR148W RPL28P02406 149 aaKnown RBP2.16□□□□□ -2.06
IMP3YHR148W YBR121C-AP0C5L4 52 aa2.16□□□□□ -2.06
IMP3YHR148W YLR156WP0CE96 114 aa2.16□□□□□ -2.06
IMP3YHR148W YLR159WP0CE97 114 aa2.16□□□□□ -2.06
IMP3YHR148W YLR161WP0CE98 114 aa2.16□□□□□ -2.06
IMP3YHR148W NHP6BP11633 99 aaKnown RBP2.16□□□□□ -2.06
IMP3YHR148W PGD1P40356 397 aa2.16□□□□□ -2.06
IMP3YHR148W MSS2P40990 351 aa2.16□□□□□ -2.06
IMP3YHR148W BOL2P53082 120 aa2.16□□□□□ -2.06
IMP3YHR148W PRM8P53174 237 aa2.16□□□□□ -2.06
IMP3YHR148W TCA17P32613 152 aa2.15□□□□□ -2.07
IMP3YHR148W SIP3P38717 1229 aa2.15□□□□□ -2.07
IMP3YHR148W VTC1P40046 129 aaRIP-Chip data2.15□□□□□ -2.07not detected
IMP3YHR148W YER135CP40082 130 aa2.15□□□□□ -2.07
IMP3YHR148W YNL194CP40169 301 aa2.15□□□□□ -2.07
IMP3YHR148W ICE2P40499 491 aa2.15□□□□□ -2.07
IMP3YHR148W FAR7P43592 221 aa2.15□□□□□ -2.07
IMP3YHR148W MGA1P53050 456 aa2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms