RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	PRE7	P23724	241 aa	Known RBP	3.11	□□□□□ -1.91
TDA3	YHR009C	PRX1	P34227	261 aa	Known RBP	3.11	□□□□□ -1.91
TDA3	YHR009C	LSM8	P47093	109 aa	Known RBP	3.11	□□□□□ -1.91
TDA3	YHR009C	MCM22	P47167	239 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	YJR141W	P47172	347 aa	Predicted RBP	3.11	□□□□□ -1.91
TDA3	YHR009C	TVP15	Q03860	143 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	MRX8	Q05473	314 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	YPS3	Q12303	508 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	SIR4	P11978	1358 aa		3.11	□□□□□ -1.91
TDA3	YHR009C	RPL28	P02406	149 aa	Known RBP	3.1	□□□□□ -1.91
TDA3	YHR009C	CMD1	P06787	147 aa	Known RBP	3.1	□□□□□ -1.91
TDA3	YHR009C	YAK1	P14680	807 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	HPM1	P40481	377 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	ADO1	P47143	340 aa	Known RBP	3.1	□□□□□ -1.91
TDA3	YHR009C	NIF3	P53081	288 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	NSA1	P53136	463 aa	Predicted RBP	3.1	□□□□□ -1.91
TDA3	YHR009C	COS6	P53344	381 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	YNL046W	P53956	172 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	YDR124W	Q04608	324 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	SYC1	Q08553	188 aa	Predicted RBP	3.1	□□□□□ -1.91
TDA3	YHR009C	JLP1	Q12358	412 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	OCA6	Q12454	224 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	YBL112C	Q3E7Y4	105 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	YBL008W-A	Q3E821	79 aa		3.1	□□□□□ -1.91
TDA3	YHR009C	YCF1	P39109	1515 aa	Known RBP	3.1	□□□□□ -1.91
TDA3	YHR009C	ESC1	Q03661	1658 aa	Known RBP	3.09	□□□□□ -1.91
TDA3	YHR009C	YOR093C	Q12275	1648 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	APA2	P22108	325 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	MRPS9	P38120	278 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	EGD2	P38879	174 aa	Known RBP	3.09	□□□□□ -1.91
TDA3	YHR009C	YMR144W	P40214	342 aa	Known RBP	3.09	□□□□□ -1.91
TDA3	YHR009C	FAR7	P43592	221 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	NUP57	P48837	541 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	TOS8	P53147	276 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	SSU72	P53538	206 aa	Predicted RBP	3.09	□□□□□ -1.91
TDA3	YHR009C	GOT1	Q03554	138 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	GIM5	Q04493	163 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	HEM25	Q07534	307 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	YPL264C	Q08980	353 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	YPL150W	Q12152	901 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	TPO4	Q12256	659 aa		3.09	□□□□□ -1.91
TDA3	YHR009C	PAN1	P32521	1480 aa		3.09	□□□□□ -1.92
TDA3	YHR009C	HTB1	P02293	131 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	HTB2	P02294	131 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	RPL25	P04456	142 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	ERD2	P18414	219 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	PPH21	P23594	369 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	RFA3	P26755	122 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
TDA3	YHR009C	TRM7	P38238	310 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	IKI1	P38874	309 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	HYR1	P40581	163 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	CCC1	P47818	322 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	YGR042W	P53227	271 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	COA4	Q05809	96 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	EMP46	Q12396	444 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	YCL012C	Q8J0M4	134 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	YPL229W	Q99395	206 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	SNT2	P53127	1403 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	KIN28	P06242	306 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	RPL27A	P0C2H6	136 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	RPL27B	P0C2H7	136 aa	Known RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	CUP2	P15315	225 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	YCR101C	P25607	182 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	RCN1	P36054	211 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	PDS1	P40316	373 aa	Predicted RBP	3.08	□□□□□ -1.92
TDA3	YHR009C	YJL028W	P47062	111 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	CWC27	Q02770	301 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	EMI1	Q04406	187 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	YPR011C	Q12251	326 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	TIM22	Q12328	207 aa		3.08	□□□□□ -1.92
TDA3	YHR009C	GEA2	P39993	1459 aa	Known RBP	3.07	□□□□□ -1.92
TDA3	YHR009C	CAT8	P39113	1433 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	GPA2	P10823	449 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	URA6	P15700	204 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	TRR2	P38816	342 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	NOP19	P53317	196 aa	Predicted RBP	3.07	□□□□□ -1.92
TDA3	YHR009C	YMD8	Q03697	442 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	RUB1	Q03919	77 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	YOL019W	Q08157	551 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	AKR2	Q12013	749 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	FYV7	Q12247	151 aa		3.07	□□□□□ -1.92
TDA3	YHR009C	SMT3	Q12306	101 aa	Known RBP	3.07	□□□□□ -1.92
TDA3	YHR009C	VPS15	P22219	1454 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	NUP159	P40477	1460 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	SOD1	P00445	154 aa	Known RBP	3.06	□□□□□ -1.92
TDA3	YHR009C	NSP1	P14907	823 aa	Known RBP	3.06	□□□□□ -1.92
TDA3	YHR009C	SRY1	P36007	326 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	ECM13	P38195	257 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	SPL2	P38839	148 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	SOK1	P40317	901 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	FMP32	P43557	207 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	OST3	P48439	350 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	RMR1	P53060	241 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	BRR6	P53062	197 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	RSM27	P53305	110 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	RCF2	P53721	224 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	TMA20	P89886	181 aa	Predicted RBP	3.06	□□□□□ -1.92
TDA3	YHR009C	NHP10	Q03435	203 aa		3.06	□□□□□ -1.92
TDA3	YHR009C	MSA1	Q08471	629 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 162.2 ms