RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W YEA6P39953 335 aa2.49□□□□□ -2.01
ECM29YHL030W CIN5P40917 295 aa2.49□□□□□ -2.01
ECM29YHL030W SMD3P43321 101 aaKnown RBP2.49□□□□□ -2.01
ECM29YHL030W YGR149WP48236 432 aa2.49□□□□□ -2.01
ECM29YHL030W YDR541CQ03049 344 aa2.49□□□□□ -2.01
ECM29YHL030W CUE4Q04201 117 aaPredicted RBP2.49□□□□□ -2.01
ECM29YHL030W DIC1Q06143 298 aa2.49□□□□□ -2.01
ECM29YHL030W PHO92Q06390 306 aa2.49□□□□□ -2.01
ECM29YHL030W YOR105WQ08504 108 aa2.49□□□□□ -2.01
ECM29YHL030W ATP14Q12349 124 aa2.49□□□□□ -2.01
ECM29YHL030W MPD1Q12404 318 aaKnown RBP2.49□□□□□ -2.01
ECM29YHL030W AHC1Q12433 566 aa2.49□□□□□ -2.01
ECM29YHL030W YLR111WQ12528 110 aa2.49□□□□□ -2.01
ECM29YHL030W YIL134C-AQ45U18 67 aa2.49□□□□□ -2.01
ECM29YHL030W YLR149CQ99296 730 aa2.49□□□□□ -2.01
ECM29YHL030W YPR096CO13587 100 aa2.48□□□□□ -2.01
ECM29YHL030W RPL1AP0CX43 217 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W RPL1BP0CX44 217 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W ECM15P35195 104 aa2.48□□□□□ -2.01
ECM29YHL030W SDS24P38314 527 aa2.48□□□□□ -2.01
ECM29YHL030W NAM8Q00539 523 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W YPL108WQ02872 168 aaPredicted RBP2.48□□□□□ -2.01
ECM29YHL030W ROT1Q03691 256 aa2.48□□□□□ -2.01
ECM29YHL030W KEI1Q06346 221 aa2.48□□□□□ -2.01
ECM29YHL030W HRD1Q08109 551 aa2.48□□□□□ -2.01
ECM29YHL030W PAA1Q12447 191 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W FMP49A0A023PZB3 126 aa2.48□□□□□ -2.01
ECM29YHL030W SCEIP03882 235 aa2.48□□□□□ -2.01
ECM29YHL030W YLL053CP0CD98 152 aa2.48□□□□□ -2.01
ECM29YHL030W YCR102CP25608 368 aa2.48□□□□□ -2.01
ECM29YHL030W CWP1P28319 239 aa2.48□□□□□ -2.01
ECM29YHL030W PAC2P39937 518 aa2.48□□□□□ -2.01
ECM29YHL030W NSA2P40078 261 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W RIB4P50861 169 aaPredicted RBP2.48□□□□□ -2.01
ECM29YHL030W THG1P53215 237 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W YNR064CP53750 290 aa2.48□□□□□ -2.01
ECM29YHL030W APJ1P53940 528 aa2.48□□□□□ -2.01
ECM29YHL030W GIS1Q03833 894 aa2.48□□□□□ -2.01
ECM29YHL030W YDL086WQ07505 273 aa2.48□□□□□ -2.01
ECM29YHL030W IRC13Q08630 104 aa2.48□□□□□ -2.01
ECM29YHL030W SWT1Q12104 458 aa2.48□□□□□ -2.01
ECM29YHL030W ORT1Q12375 292 aa2.48□□□□□ -2.01
ECM29YHL030W YPR015CQ12531 247 aa2.48□□□□□ -2.01
ECM29YHL030W YPL119C-AQ3E751 87 aa2.48□□□□□ -2.01
ECM29YHL030W YPR014CQ6B0W2 109 aa2.48□□□□□ -2.01
ECM29YHL030W Q0182Q9ZZW1 134 aa2.48□□□□□ -2.01
ECM29YHL030W SAG1P20840 650 aa2.48□□□□□ -2.01
ECM29YHL030W MSN4P33749 630 aa2.48□□□□□ -2.01
ECM29YHL030W PIG2P40187 538 aa2.48□□□□□ -2.01
ECM29YHL030W MOB2P43563 287 aa2.48□□□□□ -2.01
ECM29YHL030W MSY1P48527 492 aa2.48□□□□□ -2.01
ECM29YHL030W YGL204CP53089 101 aa2.48□□□□□ -2.01
ECM29YHL030W CUZ1P53899 274 aa2.48□□□□□ -2.01
ECM29YHL030W SNP1Q00916 300 aaPredicted RBP2.48□□□□□ -2.01
ECM29YHL030W YLR050CQ12155 161 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W FLO1P32768 1537 aa2.48□□□□□ -2.01
ECM29YHL030W RPS25BP0C0T4 108 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W FCY2P17064 533 aa2.48□□□□□ -2.01
ECM29YHL030W POF1P25576 258 aa2.48□□□□□ -2.01
ECM29YHL030W GGC1P38988 300 aa2.48□□□□□ -2.01
ECM29YHL030W TIF34P40217 347 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W AIR1P40507 360 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W ATG27P46989 271 aa2.48□□□□□ -2.01
ECM29YHL030W PET191Q02772 108 aa2.48□□□□□ -2.01
ECM29YHL030W RPC11Q04307 110 aaPredicted RBP2.48□□□□□ -2.01
ECM29YHL030W YMR254CQ04838 102 aa2.48□□□□□ -2.01
ECM29YHL030W MRPL35Q06678 367 aa2.48□□□□□ -2.01
ECM29YHL030W YOR186WQ08560 144 aa2.48□□□□□ -2.01
ECM29YHL030W RPS25AQ3E792 108 aaPredicted RBP2.48□□□□□ -2.01
ECM29YHL030W RPL14AP36105 138 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W YMR262WP38430 313 aa2.48□□□□□ -2.01
ECM29YHL030W RPL14BP38754 138 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W YPL014WQ02606 381 aa2.48□□□□□ -2.01
ECM29YHL030W CSI2Q08054 341 aa2.48□□□□□ -2.01
ECM29YHL030W RDL2Q08742 149 aaKnown RBP2.48□□□□□ -2.01
ECM29YHL030W RPL20AP0CX23 172 aaKnown RBP2.47□□□□□ -2.01
ECM29YHL030W RPL20BP0CX24 172 aaPredicted RBP2.47□□□□□ -2.01
ECM29YHL030W BET2P20133 325 aa2.47□□□□□ -2.01
ECM29YHL030W DEG1P31115 442 aaKnown RBP2.47□□□□□ -2.01
ECM29YHL030W VRP1P37370 817 aa2.47□□□□□ -2.01
ECM29YHL030W GEP4P38812 185 aa2.47□□□□□ -2.01
ECM29YHL030W YIL067CP40514 678 aa2.47□□□□□ -2.01
ECM29YHL030W GAT1P43574 510 aa2.47□□□□□ -2.01
ECM29YHL030W YIP1P53039 248 aa2.47□□□□□ -2.01
ECM29YHL030W PAU4P53427 120 aa2.47□□□□□ -2.01
ECM29YHL030W RRS1Q08746 203 aaKnown RBP2.47□□□□□ -2.01
ECM29YHL030W TGS1Q12052 315 aa2.47□□□□□ -2.01
ECM29YHL030W ELO2P25358 347 aa2.47□□□□□ -2.01
ECM29YHL030W PET18P25362 215 aa2.47□□□□□ -2.01
ECM29YHL030W YCR100CP25606 316 aa2.47□□□□□ -2.01
ECM29YHL030W IMG2P25642 146 aaPredicted RBP2.47□□□□□ -2.01
ECM29YHL030W CPR3P25719 182 aa2.47□□□□□ -2.01
ECM29YHL030W CHS7P38843 316 aa2.47□□□□□ -2.01
ECM29YHL030W SPC25P40014 221 aa2.47□□□□□ -2.01
ECM29YHL030W MSL1P40567 111 aaPredicted RBP2.47□□□□□ -2.01
ECM29YHL030W PAU5P43575 122 aa2.47□□□□□ -2.01
ECM29YHL030W XPT1P47165 209 aa2.47□□□□□ -2.01
ECM29YHL030W TAF4P50105 388 aa2.47□□□□□ -2.01
ECM29YHL030W RHO3Q00245 231 aaKnown RBP2.47□□□□□ -2.01
ECM29YHL030W SMA2Q04658 369 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms