RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C PRE6P40303 254 aaKnown RBP2.65□□□□□ -1.99
SCL1YGL011C MIC26P50087 233 aa2.65□□□□□ -1.99
SCL1YGL011C SSQ1Q05931 657 aaPredicted RBP2.65□□□□□ -1.99
SCL1YGL011C YKL183C-AQ3E765 70 aa2.65□□□□□ -1.99
SCL1YGL011C NHP6BP11633 99 aaKnown RBP2.64□□□□□ -1.99
SCL1YGL011C PBN1P25580 416 aa2.64□□□□□ -1.99
SCL1YGL011C ERG28P40030 148 aa2.64□□□□□ -1.99
SCL1YGL011C RPL9AP05738 191 aaKnown RBP2.63□□□□□ -1.99
SCL1YGL011C YBR063CP38083 404 aa2.63□□□□□ -1.99
SCL1YGL011C DOG1P38774 246 aa2.63□□□□□ -1.99
SCL1YGL011C GCN20P43535 752 aaKnown RBP2.63□□□□□ -1.99
SCL1YGL011C RPL9BP51401 191 aaKnown RBP2.63□□□□□ -1.99
SCL1YGL011C HEM25Q07534 307 aa2.63□□□□□ -1.99
SCL1YGL011C ATO3Q12359 275 aa2.63□□□□□ -1.99
SCL1YGL011C DRS2P39524 1355 aa2.62□□□□□ -1.99
SCL1YGL011C QCR6P00127 147 aa2.62□□□□□ -1.99
SCL1YGL011C MSW1P04803 379 aa2.62□□□□□ -1.99
SCL1YGL011C YPR170W-BP0C5R9 85 aa2.62□□□□□ -1.99
SCL1YGL011C SSO1P32867 290 aa2.62□□□□□ -1.99
SCL1YGL011C CBT1P36038 271 aaPredicted RBP2.62□□□□□ -1.99
SCL1YGL011C FYV6P53913 173 aa2.62□□□□□ -1.99
SCL1YGL011C ABF2Q02486 183 aa2.62□□□□□ -1.99
SCL1YGL011C PRM15Q03262 622 aa2.62□□□□□ -1.99
SCL1YGL011C MRPS8Q03799 155 aa2.62□□□□□ -1.99
SCL1YGL011C DCN1Q12395 269 aa2.62□□□□□ -1.99
SCL1YGL011C GIS3Q12418 502 aa2.62□□□□□ -1.99
SCL1YGL011C CDC28P00546 298 aaKnown RBP2.61□□□□□ -1.99
SCL1YGL011C RAS2P01120 322 aaKnown RBP2.61□□□□□ -1.99
SCL1YGL011C RPL28P02406 149 aaKnown RBP2.61□□□□□ -1.99
SCL1YGL011C YBR121C-AP0C5L4 52 aa2.61□□□□□ -1.99
SCL1YGL011C DBF2P22204 572 aa2.61□□□□□ -1.99
SCL1YGL011C PEX4P29340 183 aa2.61□□□□□ -1.99
SCL1YGL011C YHR180WP38868 163 aa2.61□□□□□ -1.99
SCL1YGL011C YNL194CP40169 301 aa2.61□□□□□ -1.99
SCL1YGL011C YIL001WP40560 513 aa2.61□□□□□ -1.99
SCL1YGL011C BRR6P53062 197 aa2.61□□□□□ -1.99
SCL1YGL011C ARR2Q06597 130 aa2.61□□□□□ -1.99
SCL1YGL011C CDC33P07260 213 aaKnown RBP2.6□□□□□ -1.99
SCL1YGL011C COQ1P18900 473 aa2.6□□□□□ -1.99
SCL1YGL011C IRC22P40006 225 aa2.6□□□□□ -1.99
SCL1YGL011C YRB1P41920 201 aaKnown RBP2.6□□□□□ -1.99
SCL1YGL011C CIS3P47001 227 aa2.6□□□□□ -1.99
SCL1YGL011C NUP57P48837 541 aa2.6□□□□□ -1.99
SCL1YGL011C DAD3P69850 94 aa2.6□□□□□ -1.99
SCL1YGL011C NEJ1Q06148 342 aa2.6□□□□□ -1.99
SCL1YGL011C SCL1P21243 252 aaKnown RBP2.59□□□□□ -1.99
SCL1YGL011C MDH3P32419 343 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
SCL1YGL011C PRP18P33411 251 aaPredicted RBP2.59□□□□□ -1.99
SCL1YGL011C DOG2P38773 246 aa2.59□□□□□ -1.99
SCL1YGL011C ADO1P47143 340 aaKnown RBP2.59□□□□□ -1.99
SCL1YGL011C RAD17P48581 401 aa2.59□□□□□ -1.99
SCL1YGL011C YGR219WP53307 113 aa2.59□□□□□ -1.99
SCL1YGL011C YMD8Q03697 442 aa2.59□□□□□ -1.99
SCL1YGL011C TRM12Q04235 462 aa2.59□□□□□ -1.99
SCL1YGL011C CDC8P00572 216 aa2.58□□□□□ -2
SCL1YGL011C STE18P18852 110 aa2.58□□□□□ -2
SCL1YGL011C OAC1P32332 324 aa2.58□□□□□ -2
SCL1YGL011C BXI1P48558 297 aa2.58□□□□□ -2
SCL1YGL011C CWC23P52868 283 aaPredicted RBP2.58□□□□□ -2
SCL1YGL011C MGA1P53050 456 aa2.58□□□□□ -2
SCL1YGL011C PGA2P53903 129 aa2.58□□□□□ -2
SCL1YGL011C YDR248CQ03786 193 aa2.58□□□□□ -2
SCL1YGL011C LSO2Q3E772 92 aaKnown RBP2.58□□□□□ -2
SCL1YGL011C YDR157WA0A023PZE8 133 aa2.57□□□□□ -2
SCL1YGL011C PRX1P34227 261 aaKnown RBP2.57□□□□□ -2
SCL1YGL011C RSM25P40496 264 aa2.57□□□□□ -2
SCL1YGL011C PRM10P42946 383 aa2.57□□□□□ -2
SCL1YGL011C DID2P69771 204 aa2.57□□□□□ -2
SCL1YGL011C LPP1Q04396 274 aa2.57□□□□□ -2
SCL1YGL011C JLP1Q12358 412 aa2.57□□□□□ -2
SCL1YGL011C PSF1Q12488 208 aa2.57□□□□□ -2
SCL1YGL011C FBA1P14540 359 aaKnown RBP2.56□□□□□ -2
SCL1YGL011C YNL010WP53981 241 aaKnown RBP2.56□□□□□ -2
SCL1YGL011C YML108WQ03759 105 aa2.56□□□□□ -2
SCL1YGL011C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SCL1YGL011C BEM2P39960 2167 aaKnown RBP2.56□□□□□ -2
SCL1YGL011C APS1P35181 156 aa2.55□□□□□ -2
SCL1YGL011C PHO88P38264 188 aaPredicted RBP2.55□□□□□ -2
SCL1YGL011C PRM8P53174 237 aa2.55□□□□□ -2
SCL1YGL011C GRX3Q03835 250 aa2.55□□□□□ -2
SCL1YGL011C SPG3Q04398 127 aaPredicted RBP2.55□□□□□ -2
SCL1YGL011C NCB2Q92317 146 aa2.55□□□□□ -2
SCL1YGL011C ATG22P25568 528 aa2.54□□□□□ -2
SCL1YGL011C ERV15P38312 142 aa2.54□□□□□ -2
SCL1YGL011C FAR7P43592 221 aa2.54□□□□□ -2
SCL1YGL011C CYT2Q00873 224 aa2.54□□□□□ -2
SCL1YGL011C REP2P03872 296 aa2.53□□□□□ -2
SCL1YGL011C NTG1P31378 399 aa2.53□□□□□ -2
SCL1YGL011C SIP3P38717 1229 aa2.53□□□□□ -2
SCL1YGL011C GAS3Q03655 524 aa2.53□□□□□ -2
SCL1YGL011C BNA7Q04066 261 aa2.53□□□□□ -2
SCL1YGL011C TDA8Q6B2U8 126 aa2.53□□□□□ -2
SCL1YGL011C CDC36P06100 191 aaPredicted RBP2.52□□□□□ -2.01
SCL1YGL011C YLR156WP0CE96 114 aa2.52□□□□□ -2.01
SCL1YGL011C YLR159WP0CE97 114 aa2.52□□□□□ -2.01
SCL1YGL011C YLR161WP0CE98 114 aa2.52□□□□□ -2.01
SCL1YGL011C RPB4P20433 221 aaPredicted RBP2.52□□□□□ -2.01
SCL1YGL011C TCA17P32613 152 aa2.52□□□□□ -2.01
SCL1YGL011C TAF14P35189 244 aa2.52□□□□□ -2.01
SCL1YGL011C POP4P38336 279 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms