RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YJR149WP47177 404 aa3.69□□□□□ -1.82
DEG1YFL001W NNT1Q05874 261 aa3.69□□□□□ -1.82
DEG1YFL001W HKR1P41809 1802 aa3.68□□□□□ -1.82
DEG1YFL001W SNA3P14359 133 aa3.68□□□□□ -1.82
DEG1YFL001W CSG2P35206 410 aa3.68□□□□□ -1.82
DEG1YFL001W MRPL39P36533 70 aa3.68□□□□□ -1.82
DEG1YFL001W SLX1P38324 304 aa3.68□□□□□ -1.82
DEG1YFL001W ARN2P38724 620 aa3.68□□□□□ -1.82
DEG1YFL001W YHB1P39676 399 aaKnown RBP3.68□□□□□ -1.82
DEG1YFL001W RPE1P46969 238 aa3.68□□□□□ -1.82
DEG1YFL001W COQ5P49017 307 aa3.68□□□□□ -1.82
DEG1YFL001W TRM9P49957 279 aa3.68□□□□□ -1.82
DEG1YFL001W OSH6Q02201 448 aa3.68□□□□□ -1.82
DEG1YFL001W CBF1P17106 351 aa3.67□□□□□ -1.82
DEG1YFL001W CKA2P19454 339 aa3.67□□□□□ -1.82
DEG1YFL001W BDH1P39714 382 aa3.67□□□□□ -1.82
DEG1YFL001W ALG13P53178 202 aa3.67□□□□□ -1.82
DEG1YFL001W YGR067CP53243 804 aa3.67□□□□□ -1.82
DEG1YFL001W TVP15Q03860 143 aa3.67□□□□□ -1.82
DEG1YFL001W YDR124WQ04608 324 aa3.67□□□□□ -1.82
DEG1YFL001W SYC1Q08553 188 aaPredicted RBP3.67□□□□□ -1.82
DEG1YFL001W YOR186WQ08560 144 aa3.67□□□□□ -1.82
DEG1YFL001W JLP1Q12358 412 aa3.67□□□□□ -1.82
DEG1YFL001W DUR1,2P32528 1835 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W HTB1P02293 131 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W HTB2P02294 131 aa3.66□□□□□ -1.82
DEG1YFL001W RPL28P02406 149 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W IDH1P28834 360 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
DEG1YFL001W YBL081WP38180 368 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W OPY1P38271 328 aa3.66□□□□□ -1.82
DEG1YFL001W SEO1P39709 593 aa3.66□□□□□ -1.82
DEG1YFL001W ADO1P47143 340 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W NUP57P48837 541 aa3.66□□□□□ -1.82
DEG1YFL001W NIF3P53081 288 aa3.66□□□□□ -1.82
DEG1YFL001W YGL034CP53186 121 aa3.66□□□□□ -1.82
DEG1YFL001W YNL046WP53956 172 aa3.66□□□□□ -1.82
DEG1YFL001W SMD1Q02260 146 aaPredicted RBP3.66□□□□□ -1.82
DEG1YFL001W YPL039WQ03080 316 aa3.66□□□□□ -1.82
DEG1YFL001W GOT1Q03554 138 aa3.66□□□□□ -1.82
DEG1YFL001W SMD2Q06217 110 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W ABP140Q08641 628 aaKnown RBP3.66□□□□□ -1.82
DEG1YFL001W YDL211CQ12121 372 aa3.66□□□□□ -1.82
DEG1YFL001W TPO4Q12256 659 aa3.66□□□□□ -1.82
DEG1YFL001W YCL012CQ8J0M4 134 aa3.66□□□□□ -1.82
DEG1YFL001W RPL27AP0C2H6 136 aaKnown RBP3.65□□□□□ -1.83
DEG1YFL001W RPL27BP0C2H7 136 aaKnown RBP3.65□□□□□ -1.83
DEG1YFL001W ERD2P18414 219 aa3.65□□□□□ -1.83
DEG1YFL001W APA2P22108 325 aa3.65□□□□□ -1.83
DEG1YFL001W PRE7P23724 241 aaKnown RBP3.65□□□□□ -1.83
DEG1YFL001W RFA3P26755 122 aaKnown RBP3.65□□□□□ -1.83
DEG1YFL001W IKI1P38874 309 aa3.65□□□□□ -1.83
DEG1YFL001W YMR144WP40214 342 aaKnown RBP3.65□□□□□ -1.83
DEG1YFL001W YFL012WP43580 148 aa3.65□□□□□ -1.83
DEG1YFL001W FYV6P53913 173 aa3.65□□□□□ -1.83
DEG1YFL001W RRP17Q04031 235 aaPredicted RBP3.65□□□□□ -1.83
DEG1YFL001W HEM25Q07534 307 aa3.65□□□□□ -1.83
DEG1YFL001W YPS3Q12303 508 aa3.65□□□□□ -1.83
DEG1YFL001W YBL008W-AQ3E821 79 aa3.65□□□□□ -1.83
DEG1YFL001W FLO1P32768 1537 aa3.64□□□□□ -1.83
DEG1YFL001W MAK31P23059 88 aa3.64□□□□□ -1.83
DEG1YFL001W MRPS9P38120 278 aa3.64□□□□□ -1.83
DEG1YFL001W BRR6P53062 197 aa3.64□□□□□ -1.83
DEG1YFL001W TOS8P53147 276 aa3.64□□□□□ -1.83
DEG1YFL001W GET1P53192 235 aa3.64□□□□□ -1.83
DEG1YFL001W MRX8Q05473 314 aa3.64□□□□□ -1.83
DEG1YFL001W YBL112CQ3E7Y4 105 aa3.64□□□□□ -1.83
DEG1YFL001W TUS1Q06412 1307 aa3.63□□□□□ -1.83
DEG1YFL001W CPT1P17898 393 aa3.63□□□□□ -1.83
DEG1YFL001W PPH21P23594 369 aa3.63□□□□□ -1.83
DEG1YFL001W YOX1P34161 385 aa3.63□□□□□ -1.83
DEG1YFL001W NOP19P53317 196 aaPredicted RBP3.63□□□□□ -1.83
DEG1YFL001W YDR222WQ04925 415 aa3.63□□□□□ -1.83
DEG1YFL001W YPL264CQ08980 353 aa3.63□□□□□ -1.83
DEG1YFL001W TIM22Q12328 207 aa3.63□□□□□ -1.83
DEG1YFL001W YPL229WQ99395 206 aa3.63□□□□□ -1.83
DEG1YFL001W QCR7P00128 127 aa3.62□□□□□ -1.83
DEG1YFL001W CUP2P15315 225 aa3.62□□□□□ -1.83
DEG1YFL001W URA6P15700 204 aa3.62□□□□□ -1.83
DEG1YFL001W ADE1P27616 306 aa3.62□□□□□ -1.83
DEG1YFL001W ECM4P36156 370 aa3.62□□□□□ -1.83
DEG1YFL001W TRM7P38238 310 aaKnown RBP3.62□□□□□ -1.83
DEG1YFL001W SUR2P38992 349 aa3.62□□□□□ -1.83
DEG1YFL001W YJL028WP47062 111 aa3.62□□□□□ -1.83
DEG1YFL001W YPL150WQ12152 901 aa3.62□□□□□ -1.83
DEG1YFL001W SMT3Q12306 101 aaKnown RBP3.62□□□□□ -1.83
DEG1YFL001W YAK1P14680 807 aa3.61□□□□□ -1.83
DEG1YFL001W SRY1P36007 326 aa3.61□□□□□ -1.83
DEG1YFL001W ECM13P38195 257 aa3.61□□□□□ -1.83
DEG1YFL001W TEM1P38987 245 aa3.61□□□□□ -1.83
DEG1YFL001W MTW1P39731 289 aa3.61□□□□□ -1.83
DEG1YFL001W IRC18P47056 224 aa3.61□□□□□ -1.83
DEG1YFL001W RSM27P53305 110 aa3.61□□□□□ -1.83
DEG1YFL001W EMI1Q04406 187 aa3.61□□□□□ -1.83
DEG1YFL001W BMH1P29311 267 aaKnown RBP3.6□□□□□ -1.83
DEG1YFL001W ACP1P32463 125 aa3.6□□□□□ -1.83
DEG1YFL001W SSH1P38353 490 aaKnown RBP3.6□□□□□ -1.83
DEG1YFL001W OST3P48439 350 aa3.6□□□□□ -1.83
DEG1YFL001W YPR011CQ12251 326 aa3.6□□□□□ -1.83
DEG1YFL001W ISD11Q6Q560 94 aa3.6□□□□□ -1.83
DEG1YFL001W YEL009C-AA0A023PZF2 135 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms