RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YPL229WQ99395 206 aa3.32□□□□□ -1.88
SPT3YDR392W ERD2P18414 219 aa3.31□□□□□ -1.88
SPT3YDR392W ANB1P19211 157 aa3.31□□□□□ -1.88
SPT3YDR392W ATP7P30902 174 aa3.31□□□□□ -1.88
SPT3YDR392W SAC1P32368 623 aaKnown RBP3.31□□□□□ -1.88
SPT3YDR392W CAT2P32796 670 aaKnown RBP3.31□□□□□ -1.88
SPT3YDR392W ROT2P38138 954 aa3.31□□□□□ -1.88
SPT3YDR392W MNN9P39107 395 aaKnown RBP3.31□□□□□ -1.88
SPT3YDR392W HPM1P40481 377 aa3.31□□□□□ -1.88
SPT3YDR392W YGR210CP42942 411 aa3.31□□□□□ -1.88
SPT3YDR392W PTR3P43606 678 aa3.31□□□□□ -1.88
SPT3YDR392W YJL016WP47072 561 aa3.31□□□□□ -1.88
SPT3YDR392W LSM8P47093 109 aaKnown RBP3.31□□□□□ -1.88
SPT3YDR392W CWC23P52868 283 aaPredicted RBP3.31□□□□□ -1.88
SPT3YDR392W NOP19P53317 196 aaPredicted RBP3.31□□□□□ -1.88
SPT3YDR392W ARC35P53731 342 aaKnown RBP3.31□□□□□ -1.88
SPT3YDR392W YMR244WQ04018 355 aa3.31□□□□□ -1.88
SPT3YDR392W SWA2Q06677 668 aa3.31□□□□□ -1.88
SPT3YDR392W ASA1Q06822 443 aa3.31□□□□□ -1.88
SPT3YDR392W COQ10Q08058 207 aa3.31□□□□□ -1.88
SPT3YDR392W ZEO1Q08245 113 aa3.31□□□□□ -1.88
SPT3YDR392W YNG1Q08465 219 aa3.31□□□□□ -1.88
SPT3YDR392W YPR096CO13587 100 aa3.3□□□□□ -1.88
SPT3YDR392W ATP6P00854 259 aa3.3□□□□□ -1.88
SPT3YDR392W CAP2P13517 287 aa3.3□□□□□ -1.88
SPT3YDR392W HEM15P16622 393 aa3.3□□□□□ -1.88
SPT3YDR392W ATG22P25568 528 aa3.3□□□□□ -1.88
SPT3YDR392W MRP20P32387 263 aa3.3□□□□□ -1.88
SPT3YDR392W HYM1P32464 399 aa3.3□□□□□ -1.88
SPT3YDR392W RRP4P38792 359 aaKnown RBP3.3□□□□□ -1.88
SPT3YDR392W RMD6P39975 231 aa3.3□□□□□ -1.88
SPT3YDR392W YRB2P40517 327 aa3.3□□□□□ -1.88
SPT3YDR392W TIR3P40552 269 aa3.3□□□□□ -1.88
SPT3YDR392W OST1P41543 476 aaKnown RBP3.3□□□□□ -1.88
SPT3YDR392W XPT1P47165 209 aa3.3□□□□□ -1.88
SPT3YDR392W CAF40P53829 373 aa3.3□□□□□ -1.88
SPT3YDR392W SAM50P53969 484 aa3.3□□□□□ -1.88
SPT3YDR392W ARV1Q06541 321 aa3.3□□□□□ -1.88
SPT3YDR392W YOR289WQ12012 251 aaPredicted RBP3.3□□□□□ -1.88
SPT3YDR392W PPT2Q12036 173 aa3.3□□□□□ -1.88
SPT3YDR392W YPL247CQ12523 523 aa3.3□□□□□ -1.88
SPT3YDR392W MED11Q99278 115 aa3.3□□□□□ -1.88
SPT3YDR392W RAD7P06779 565 aa3.29□□□□□ -1.88
SPT3YDR392W DST1P07273 309 aa3.29□□□□□ -1.88
SPT3YDR392W NFT1P0CE68 1218 aa3.29□□□□□ -1.88
SPT3YDR392W STF2P16965 84 aa3.29□□□□□ -1.88
SPT3YDR392W RPL24BP24000 155 aaKnown RBP3.29□□□□□ -1.88
SPT3YDR392W UBC8P28263 218 aa3.29□□□□□ -1.88
SPT3YDR392W PRP21P32524 280 aaPredicted RBP3.29□□□□□ -1.88
SPT3YDR392W YBR285WP38354 144 aa3.29□□□□□ -1.88
SPT3YDR392W MLH1P38920 769 aa3.29□□□□□ -1.88
SPT3YDR392W KRE9P39005 276 aa3.29□□□□□ -1.88
SPT3YDR392W ARC1P46672 376 aaKnown RBP3.29□□□□□ -1.88
SPT3YDR392W TOS8P53147 276 aa3.29□□□□□ -1.88
SPT3YDR392W TWF1P53250 332 aa3.29□□□□□ -1.88
SPT3YDR392W CSN9Q03981 162 aa3.29□□□□□ -1.88
SPT3YDR392W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
SPT3YDR392W HSP31Q04432 237 aa3.29□□□□□ -1.88
SPT3YDR392W GAL83Q04739 417 aa3.29□□□□□ -1.88
SPT3YDR392W YET3Q07451 203 aa3.29□□□□□ -1.88
SPT3YDR392W YPD1Q07688 167 aa3.29□□□□□ -1.88
SPT3YDR392W GAL1P04385 528 aa3.28□□□□□ -1.88
SPT3YDR392W ARG3P05150 338 aa3.28□□□□□ -1.88
SPT3YDR392W MSS18P08593 268 aa3.28□□□□□ -1.88
SPT3YDR392W HXT2P23585 541 aa3.28□□□□□ -1.88
SPT3YDR392W STE50P25344 346 aa3.28□□□□□ -1.88
SPT3YDR392W YCR090CP25654 182 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W PDC2P32896 925 aa3.28□□□□□ -1.88
SPT3YDR392W SIP2P34164 415 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W JEN1P36035 616 aa3.28□□□□□ -1.88
SPT3YDR392W SPC34P36131 295 aa3.28□□□□□ -1.88
SPT3YDR392W ADH5P38113 351 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W THI2P38141 450 aa3.28□□□□□ -1.88
SPT3YDR392W IPI1P38803 334 aaPredicted RBP3.28□□□□□ -1.88
SPT3YDR392W EGD2P38879 174 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W PFS2P42841 465 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W SER2P42941 309 aa3.28□□□□□ -1.88
SPT3YDR392W PAC10P48363 199 aa3.28□□□□□ -1.88
SPT3YDR392W NAS6P50086 228 aa3.28□□□□□ -1.88
SPT3YDR392W CUS2P53830 285 aaPredicted RBP3.28□□□□□ -1.88
SPT3YDR392W COX12Q01519 83 aa3.28□□□□□ -1.88
SPT3YDR392W YML131WQ03102 365 aa3.28□□□□□ -1.88
SPT3YDR392W TVP15Q03860 143 aa3.28□□□□□ -1.88
SPT3YDR392W DPB4Q04603 196 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W ATG38Q05789 226 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W NEJ1Q06148 342 aa3.28□□□□□ -1.88
SPT3YDR392W NDE2Q07500 545 aa3.28□□□□□ -1.88
SPT3YDR392W SKI7Q08491 747 aaPredicted RBP3.28□□□□□ -1.88
SPT3YDR392W SYC1Q08553 188 aaPredicted RBP3.28□□□□□ -1.88
SPT3YDR392W FCY1Q12178 158 aa3.28□□□□□ -1.88
SPT3YDR392W RPN5Q12250 445 aaKnown RBP3.28□□□□□ -1.88
SPT3YDR392W RPN6Q12377 434 aa3.28□□□□□ -1.88
SPT3YDR392W TPK3P05986 398 aa3.27□□□□□ -1.89
SPT3YDR392W SIR2P06700 562 aa3.27□□□□□ -1.89
SPT3YDR392W ZWF1P11412 505 aaKnown RBP3.27□□□□□ -1.89
SPT3YDR392W RNP1P32385 249 aa3.27□□□□□ -1.89
SPT3YDR392W VAM7P32912 316 aa3.27□□□□□ -1.89
SPT3YDR392W IST2P38250 946 aa3.27□□□□□ -1.89
SPT3YDR392W PHO89P38361 574 aa3.27□□□□□ -1.89
SPT3YDR392W PEP8P40335 379 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms