RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W YJL027CP47063 138 aaPredicted RBP1.21□□□□□ -2.22
SNF5YBR289W ACC1Q00955 2233 aaKnown RBP1.21□□□□□ -2.22
SNF5YBR289W SNT2P53127 1403 aa1.21□□□□□ -2.22
SNF5YBR289W YRF1-1P0CX20 1796 aa1.2□□□□□ -2.22
SNF5YBR289W YRF1-5P0CX21 1796 aa1.2□□□□□ -2.22
SNF5YBR289W YRF1-8P0CX22 1796 aa1.2□□□□□ -2.22
SNF5YBR289W SEC4P07560 215 aaKnown RBP1.2□□□□□ -2.22
SNF5YBR289W YCR016WP25617 290 aaKnown RBP1.2□□□□□ -2.22
SNF5YBR289W RNP1P32385 249 aa1.2□□□□□ -2.22
SNF5YBR289W YKR032WP36127 104 aa1.2□□□□□ -2.22
SNF5YBR289W GRE3P38715 327 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
SNF5YBR289W TCD1P38756 429 aa1.2□□□□□ -2.22
SNF5YBR289W OST2P46964 130 aa1.2□□□□□ -2.22
SNF5YBR289W GTR2P53290 341 aa1.2□□□□□ -2.22
SNF5YBR289W SLM2P53955 656 aa1.2□□□□□ -2.22
SNF5YBR289W CDD1Q06549 142 aa1.2□□□□□ -2.22
SNF5YBR289W SLD7Q08457 257 aa1.2□□□□□ -2.22
SNF5YBR289W CDC36P06100 191 aaPredicted RBP1.2□□□□□ -2.22
SNF5YBR289W MRPL25P23369 157 aa1.2□□□□□ -2.22
SNF5YBR289W PBN1P25580 416 aa1.2□□□□□ -2.22
SNF5YBR289W YPT52P36018 234 aaKnown RBP1.2□□□□□ -2.22
SNF5YBR289W YJR141WP47172 347 aaPredicted RBP1.2□□□□□ -2.22
SNF5YBR289W RAD17P48581 401 aa1.2□□□□□ -2.22
SNF5YBR289W CWC23P52868 283 aaPredicted RBP1.2□□□□□ -2.22
SNF5YBR289W ERV29P53337 310 aa1.2□□□□□ -2.22
SNF5YBR289W SPG3Q04398 127 aaPredicted RBP1.2□□□□□ -2.22
SNF5YBR289W ATG38Q05789 226 aaKnown RBP1.2□□□□□ -2.22
SNF5YBR289W GGA1Q06336 557 aa1.2□□□□□ -2.22
SNF5YBR289W ATG17Q06410 417 aa1.2□□□□□ -2.22
SNF5YBR289W YPR147CQ06522 304 aaKnown RBP1.2□□□□□ -2.22
SNF5YBR289W PST1Q12355 444 aa1.2□□□□□ -2.22
SNF5YBR289W MYO4P32492 1471 aa1.2□□□□□ -2.22
SNF5YBR289W TY1B-BRQ12193 1756 aa1.2□□□□□ -2.22
SNF5YBR289W TY1B-GR3Q12316 1755 aa1.2□□□□□ -2.22
SNF5YBR289W TY1B-ORQ92393 1755 aa1.2□□□□□ -2.22
SNF5YBR289W REP2P03872 296 aa1.19□□□□□ -2.22
SNF5YBR289W MER1P16523 270 aa1.19□□□□□ -2.22
SNF5YBR289W CDC10P25342 322 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W TCA17P32613 152 aa1.19□□□□□ -2.22
SNF5YBR289W RCN1P36054 211 aa1.19□□□□□ -2.22
SNF5YBR289W MIC12P38341 106 aa1.19□□□□□ -2.22
SNF5YBR289W MGA1P53050 456 aa1.19□□□□□ -2.22
SNF5YBR289W PGA2P53903 129 aa1.19□□□□□ -2.22
SNF5YBR289W DID2P69771 204 aa1.19□□□□□ -2.22
SNF5YBR289W SEY1Q99287 776 aa1.19□□□□□ -2.22
SNF5YBR289W TY1B-NL2Q99337 1749 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W QCR6P00127 147 aa1.19□□□□□ -2.22
SNF5YBR289W YMR31P19955 123 aa1.19□□□□□ -2.22
SNF5YBR289W RAD51P25454 400 aa1.19□□□□□ -2.22
SNF5YBR289W VMA6P32366 345 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W SEC17P32602 292 aa1.19□□□□□ -2.22
SNF5YBR289W UTR5P32630 166 aa1.19□□□□□ -2.22
SNF5YBR289W PRX1P34227 261 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W SSH1P38353 490 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W YHR125WP38831 101 aa1.19□□□□□ -2.22
SNF5YBR289W YHR127WP38833 243 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W CAT5P41735 233 aa1.19□□□□□ -2.22
SNF5YBR289W YDR124WQ04608 324 aa1.19□□□□□ -2.22
SNF5YBR289W INM2Q05533 292 aa1.19□□□□□ -2.22
SNF5YBR289W RRP40Q08285 240 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W YNG1Q08465 219 aa1.19□□□□□ -2.22
SNF5YBR289W PSF1Q12488 208 aa1.19□□□□□ -2.22
SNF5YBR289W ARO1P08566 1588 aaKnown RBP1.19□□□□□ -2.22
SNF5YBR289W BCK1Q01389 1478 aa1.19□□□□□ -2.22
SNF5YBR289W MMS22Q06164 1454 aa1.19□□□□□ -2.22
SNF5YBR289W RPL9AP05738 191 aaKnown RBP1.18□□□□□ -2.22
SNF5YBR289W ERG24P32462 438 aaKnown RBP1.18□□□□□ -2.22
SNF5YBR289W SRB4P32569 687 aa1.18□□□□□ -2.22
SNF5YBR289W MGM101P32787 269 aaKnown RBP1.18□□□□□ -2.22
SNF5YBR289W YOR062CP36025 268 aa1.18□□□□□ -2.22
SNF5YBR289W RPL9BP51401 191 aaKnown RBP1.18□□□□□ -2.22
SNF5YBR289W MRPL50P53724 139 aa1.18□□□□□ -2.22
SNF5YBR289W RGM1Q00453 211 aa1.18□□□□□ -2.22
SNF5YBR289W CDC123Q05791 360 aa1.18□□□□□ -2.22
SNF5YBR289W BUD3P25558 1636 aa1.18□□□□□ -2.22
SNF5YBR289W TY3B-GQ99315 1547 aa1.18□□□□□ -2.22
SNF5YBR289W SPP41P38904 1435 aa1.18□□□□□ -2.22
SNF5YBR289W CGR1P53188 120 aa1.18□□□□□ -2.22
SNF5YBR289W GIM3P53900 129 aa1.18□□□□□ -2.22
SNF5YBR289W SSQ1Q05931 657 aaPredicted RBP1.18□□□□□ -2.22
SNF5YBR289W RRS1Q08746 203 aaKnown RBP1.18□□□□□ -2.22
SNF5YBR289W CHC1P22137 1653 aaKnown RBP1.18□□□□□ -2.22
SNF5YBR289W CDC33P07260 213 aaKnown RBP1.17□□□□□ -2.22
SNF5YBR289W DSF1P0CX08 502 aa1.17□□□□□ -2.22
SNF5YBR289W YNR073CP0CX09 502 aa1.17□□□□□ -2.22
SNF5YBR289W ASF2P32448 525 aaPredicted RBP1.17□□□□□ -2.22
SNF5YBR289W YHR180WP38868 163 aa1.17□□□□□ -2.22
SNF5YBR289W YER034WP40022 185 aaKnown RBP1.17□□□□□ -2.22
SNF5YBR289W MRPS17Q03246 237 aaPredicted RBP1.17□□□□□ -2.22
SNF5YBR289W YOR1P53049 1477 aa1.17□□□□□ -2.22
SNF5YBR289W SNF6P18888 332 aa1.17□□□□□ -2.22
SNF5YBR289W APA2P22108 325 aa1.17□□□□□ -2.22
SNF5YBR289W SGE1P33335 543 aa1.17□□□□□ -2.22
SNF5YBR289W FZO1P38297 855 aa1.17□□□□□ -2.22
SNF5YBR289W YMR279CQ03263 540 aa1.17□□□□□ -2.22
SNF5YBR289W SUE1Q06524 206 aa1.17□□□□□ -2.22
SNF5YBR289W AKR2Q12013 749 aa1.17□□□□□ -2.22
SNF5YBR289W SAS5Q99314 248 aa1.17□□□□□ -2.22
SNF5YBR289W SSN2P38931 1420 aa1.17□□□□□ -2.22
SNF5YBR289W STU1P38198 1513 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms