RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W PRS4P38063 326 aaPredicted RBP3.53□□□□□ -1.84
CKS1YBR135W PRS2P38620 318 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W BIG1P38813 335 aa3.53□□□□□ -1.84
CKS1YBR135W SNZ3P43545 298 aa3.53□□□□□ -1.84
CKS1YBR135W NBP35P52920 328 aa3.53□□□□□ -1.84
CKS1YBR135W MAL13P53338 473 aa3.53□□□□□ -1.84
CKS1YBR135W SSU72P53538 206 aaPredicted RBP3.53□□□□□ -1.84
CKS1YBR135W ZRG17P53735 605 aa3.53□□□□□ -1.84
CKS1YBR135W SNZ2P53824 298 aa3.53□□□□□ -1.84
CKS1YBR135W FMP41P53889 259 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W YDR222WQ04925 415 aa3.53□□□□□ -1.84
CKS1YBR135W SPC2Q04969 178 aa3.53□□□□□ -1.84
CKS1YBR135W SDO1Q07953 250 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W SEY1Q99287 776 aa3.53□□□□□ -1.84
CKS1YBR135W AI5_BETAQ9ZZX0 354 aa3.53□□□□□ -1.84
CKS1YBR135W SEN1Q00416 2231 aaKnown RBP3.53□□□□□ -1.84
CKS1YBR135W STE18P18852 110 aa3.52□□□□□ -1.85
CKS1YBR135W ADE1P27616 306 aa3.52□□□□□ -1.85
CKS1YBR135W CAM1P29547 415 aaKnown RBP3.52□□□□□ -1.85
CKS1YBR135W SGE1P33335 543 aa3.52□□□□□ -1.85
CKS1YBR135W PRP18P33411 251 aaPredicted RBP3.52□□□□□ -1.85
CKS1YBR135W CSG2P35206 410 aa3.52□□□□□ -1.85
CKS1YBR135W RIB1P38066 345 aa3.52□□□□□ -1.85
CKS1YBR135W RTC3P38804 111 aaPredicted RBP3.52□□□□□ -1.85
CKS1YBR135W YIL001WP40560 513 aa3.52□□□□□ -1.85
CKS1YBR135W ERG10P41338 398 aaKnown RBP3.52□□□□□ -1.85
CKS1YBR135W YJR012CP47087 207 aa3.52□□□□□ -1.85
CKS1YBR135W OSH6Q02201 448 aa3.52□□□□□ -1.85
CKS1YBR135W PRM15Q03262 622 aa3.52□□□□□ -1.85
CKS1YBR135W YDR209CQ03480 137 aa3.52□□□□□ -1.85
CKS1YBR135W ARO80Q04052 950 aa3.52□□□□□ -1.85
CKS1YBR135W THP2O13539 261 aaKnown RBP3.51□□□□□ -1.85
CKS1YBR135W AST1P35183 429 aa3.51□□□□□ -1.85
CKS1YBR135W YET1P35723 206 aa3.51□□□□□ -1.85
CKS1YBR135W CBT1P36038 271 aaPredicted RBP3.51□□□□□ -1.85
CKS1YBR135W ECM13P38195 257 aa3.51□□□□□ -1.85
CKS1YBR135W POP7P38291 140 aa3.51□□□□□ -1.85
CKS1YBR135W COS4P43542 379 aa3.51□□□□□ -1.85
CKS1YBR135W YJR079WP47126 109 aa3.51□□□□□ -1.85
CKS1YBR135W SLX9P53251 210 aaPredicted RBP3.51□□□□□ -1.85
CKS1YBR135W SPO77Q06134 477 aa3.51□□□□□ -1.85
CKS1YBR135W RPL35AP0CX84 120 aaKnown RBP3.5□□□□□ -1.85
CKS1YBR135W RPL35BP0CX85 120 aaKnown RBP3.5□□□□□ -1.85
CKS1YBR135W SNF6P18888 332 aa3.5□□□□□ -1.85
CKS1YBR135W VMA6P32366 345 aaKnown RBP3.5□□□□□ -1.85
CKS1YBR135W MED8P38304 223 aa3.5□□□□□ -1.85
CKS1YBR135W PHO89P38361 574 aa3.5□□□□□ -1.85
CKS1YBR135W YIR035CP40579 254 aa3.5□□□□□ -1.85
CKS1YBR135W RPL10P41805 221 aaKnown RBP3.5□□□□□ -1.85
CKS1YBR135W TMA22P47089 198 aaPredicted RBP3.5□□□□□ -1.85
CKS1YBR135W SWT21P53873 357 aaPredicted RBP3.5□□□□□ -1.85
CKS1YBR135W YNL095CP53932 642 aa3.5□□□□□ -1.85
CKS1YBR135W SPG3Q04398 127 aaPredicted RBP3.5□□□□□ -1.85
CKS1YBR135W CDC123Q05791 360 aa3.5□□□□□ -1.85
CKS1YBR135W ATG17Q06410 417 aa3.5□□□□□ -1.85
CKS1YBR135W GRE1Q08969 168 aa3.5□□□□□ -1.85
CKS1YBR135W MSH5Q12175 901 aa3.5□□□□□ -1.85
CKS1YBR135W ATG5Q12380 294 aa3.5□□□□□ -1.85
CKS1YBR135W FBA1P14540 359 aaKnown RBP3.49□□□□□ -1.85
CKS1YBR135W SEN2P16658 377 aa3.49□□□□□ -1.85
CKS1YBR135W ERG2P32352 222 aa3.49□□□□□ -1.85
CKS1YBR135W PRY2P36110 329 aa3.49□□□□□ -1.85
CKS1YBR135W YBL081WP38180 368 aaKnown RBP3.49□□□□□ -1.85
CKS1YBR135W MIC12P38341 106 aa3.49□□□□□ -1.85
CKS1YBR135W YHI9P38765 294 aa3.49□□□□□ -1.85
CKS1YBR135W YEL075CP39972 122 aa3.49□□□□□ -1.85
CKS1YBR135W YGL159WP53110 370 aa3.49□□□□□ -1.85
CKS1YBR135W KRE28Q04431 385 aa3.49□□□□□ -1.85
CKS1YBR135W FAR8Q05040 523 aa3.49□□□□□ -1.85
CKS1YBR135W DCR2Q05924 578 aa3.49□□□□□ -1.85
CKS1YBR135W RIO1Q12196 484 aaKnown RBP3.49□□□□□ -1.85
CKS1YBR135W EMP46Q12396 444 aa3.49□□□□□ -1.85
CKS1YBR135W MSB2P32334 1306 aa3.48□□□□□ -1.85
CKS1YBR135W QRI5P32344 111 aa3.48□□□□□ -1.85
CKS1YBR135W AGA2P32781 87 aa3.48□□□□□ -1.85
CKS1YBR135W ERG28P40030 148 aa3.48□□□□□ -1.85
CKS1YBR135W YFR045WP43617 309 aa3.48□□□□□ -1.85
CKS1YBR135W TVP15Q03860 143 aa3.48□□□□□ -1.85
CKS1YBR135W IES3Q12345 250 aa3.48□□□□□ -1.85
CKS1YBR135W YBR121C-AP0C5L4 52 aa3.47□□□□□ -1.85
CKS1YBR135W HEK2P38199 381 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85 RIP-Chip
CKS1YBR135W URA8P38627 578 aaPredicted RBP3.47□□□□□ -1.85
CKS1YBR135W YHL049CP38722 271 aa3.47□□□□□ -1.85
CKS1YBR135W SMB1P40018 196 aaKnown RBP3.47□□□□□ -1.85
CKS1YBR135W YNL194CP40169 301 aa3.47□□□□□ -1.85
CKS1YBR135W RPC17P47076 161 aa3.47□□□□□ -1.85
CKS1YBR135W GET1P53192 235 aa3.47□□□□□ -1.85
CKS1YBR135W NOP19P53317 196 aaPredicted RBP3.47□□□□□ -1.85
CKS1YBR135W ACC1Q00955 2233 aaKnown RBP3.46□□□□□ -1.86
CKS1YBR135W QCR7P00128 127 aa3.46□□□□□ -1.86
CKS1YBR135W HTB1P02293 131 aaKnown RBP3.46□□□□□ -1.86
CKS1YBR135W HTB2P02294 131 aa3.46□□□□□ -1.86
CKS1YBR135W YOL163WP0CF20 169 aa3.46□□□□□ -1.86
CKS1YBR135W COS2P0CX12 379 aa3.46□□□□□ -1.86
CKS1YBR135W COS3P0CX13 379 aa3.46□□□□□ -1.86
CKS1YBR135W YMR31P19955 123 aa3.46□□□□□ -1.86
CKS1YBR135W FPR1P20081 114 aaKnown RBP3.46□□□□□ -1.86
CKS1YBR135W RPO26P20435 155 aa3.46□□□□□ -1.86
CKS1YBR135W RNA15P25299 296 aaPredicted RBP3.46□□□□□ -1.86
CKS1YBR135W FES1P38260 290 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms