RNA–Protein interactions for RNA: YBL048W

RRT1, Transcript of Protein of unknown function, yeast

Gene RRT1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT1	YBL048W	YPR170W-B	P0C5R9	85 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	CDC10	P25342	322 aa	Known RBP	0.72	□□□□□ -2.29
RRT1	YBL048W	NTF2	P33331	125 aa	Known RBP	0.72	□□□□□ -2.29
RRT1	YBL048W	YBR063C	P38083	404 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	ERV15	P38312	142 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	YHR022C	P38763	256 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	VTC1	P40046	129 aa	RIP-Chip data	0.72	□□□□□ -2.29	not detected
RRT1	YBL048W	PEX17	P40155	199 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	YKE4	P40544	346 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	PRM10	P42946	383 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	LIA1	P47120	325 aa	Known RBP	0.72	□□□□□ -2.29
RRT1	YBL048W	ERG25	P53045	309 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	ERV29	P53337	310 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	ABF2	Q02486	183 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	YLR283W	Q05867	314 aa		0.72	□□□□□ -2.29
RRT1	YBL048W	USB1	Q12208	290 aa	Known RBP	0.72	□□□□□ -2.29
RRT1	YBL048W	CDC7	P06243	507 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	RHO1	P06780	209 aa	Known RBP	0.71	□□□□□ -2.3
RRT1	YBL048W	DDI2	P0CH63	225 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	DDI3	P0CH64	225 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	MDH2	P22133	377 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	VPS21	P36017	210 aa	Known RBP	0.71	□□□□□ -2.3
RRT1	YBL048W	DSE2	P38844	325 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	YER085C	P40058	173 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	COX15	P40086	486 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	RSM25	P40496	264 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	RPL33B	P41056	107 aa	Known RBP	0.71	□□□□□ -2.3
RRT1	YBL048W	RPC17	P47076	161 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
RRT1	YBL048W	YMD8	Q03697	442 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	SPG3	Q04398	127 aa	Predicted RBP	0.71	□□□□□ -2.3
RRT1	YBL048W	TPO4	Q12256	659 aa		0.71	□□□□□ -2.3
RRT1	YBL048W	DRS2	P39524	1355 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	SPT3	P06844	337 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	PET9	P18239	318 aa	Known RBP	0.7	□□□□□ -2.3
RRT1	YBL048W	MEI4	P29467	408 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	AVT2	P39981	480 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	IRC22	P40006	225 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	AGE2	P40529	298 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	AIF1	P52923	378 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	YNR062C	P53748	327 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	TRM12	Q04235	462 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	CDC123	Q05791	360 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	DCN1	Q12395	269 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	PSF1	Q12488	208 aa		0.7	□□□□□ -2.3
RRT1	YBL048W	LSO2	Q3E772	92 aa	Known RBP	0.7	□□□□□ -2.3
RRT1	YBL048W	UBR2	Q07963	1872 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	CYR1	P08678	2026 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	THP2	O13539	261 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	CDC28	P00546	298 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	REP2	P03872	296 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	URA6	P15700	204 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	YMR31	P19955	123 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	RPL24B	P24000	155 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	ATG22	P25568	528 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	VMA6	P32366	345 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	SRY1	P36007	326 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	YKR045C	P36138	183 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	MIC12	P38341	106 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	DOG2	P38773	246 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	SVP26	P38869	228 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	RTR1	P40084	226 aa	Predicted RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	PRE6	P40303	254 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	PGD1	P40356	397 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	MIC26	P50087	233 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	ALG13	P53178	202 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	FYV6	P53913	173 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	YNL010W	P53981	241 aa	Known RBP	0.69	□□□□□ -2.3
RRT1	YBL048W	DID2	P69771	204 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	YML108W	Q03759	105 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	LPP1	Q04396	274 aa		0.69	□□□□□ -2.3
RRT1	YBL048W	YIL177C	P40434	1758 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	YJL225C	P40889	1758 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	RPL28	P02406	149 aa	Known RBP	0.68	□□□□□ -2.3
RRT1	YBL048W	YOL162W	P0CF19	215 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	DBF2	P22204	572 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	PPA2	P28239	310 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	SSO1	P32867	290 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	BMH2	P34730	273 aa	Known RBP	0.68	□□□□□ -2.3
RRT1	YBL048W	YBR219C	P38317	127 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	POP4	P38336	279 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	URA8	P38627	578 aa	Predicted RBP	0.68	□□□□□ -2.3
RRT1	YBL048W	RTC3	P38804	111 aa	Predicted RBP	0.68	□□□□□ -2.3
RRT1	YBL048W	ICE2	P40499	491 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	TIR3	P40552	269 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	BRR6	P53062	197 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	PRM8	P53174	237 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	BUD25	P85052	153 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	SNZ1	Q03148	297 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	GAS3	Q03655	524 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	YDR248C	Q03786	193 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	SML1	Q04964	104 aa		0.68	□□□□□ -2.3
RRT1	YBL048W	FLO9	P39712	1322 aa		0.67	□□□□□ -2.3
RRT1	YBL048W	RPL27B	P0C2H7	136 aa	Known RBP	0.67	□□□□□ -2.3
RRT1	YBL048W	YLR156W	P0CE96	114 aa		0.67	□□□□□ -2.3
RRT1	YBL048W	YLR159W	P0CE97	114 aa		0.67	□□□□□ -2.3
RRT1	YBL048W	YLR161W	P0CE98	114 aa		0.67	□□□□□ -2.3
RRT1	YBL048W	NHP6B	P11633	99 aa	Known RBP	0.67	□□□□□ -2.3
RRT1	YBL048W	MRPS28	P21771	286 aa		0.67	□□□□□ -2.3
RRT1	YBL048W	YGL010W	P25338	174 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms