RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 RIPOR3Q96MK2 946 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 PHF7Q9BWX1 381 aaPredicted RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 ADAM7Q9H2U9 754 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 SERTAD1Q9UHV2 236 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 CPSF3Q9UKF6 684 aaKnown RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 UBQLN1Q9UMX0 589 aaKnown RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 STYXL1Q9Y6J8 313 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
LINC00339-207ENST00000634712 SLFN14P0C7P3 912 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 PFKFB1P16118 471 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
LINC00339-207ENST00000634712 CYP3A5P20815 502 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 BRCC3P46736 316 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 CASP5P51878 434 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 CBX2Q14781 532 aaPredicted RBP17.06■□□□□ 0.32
LINC00339-207ENST00000634712 ATAT1Q5SQI0 421 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 CNNM4Q6P4Q7 775 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 UNC13DQ70J99 1090 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 SUSD6Q92537 303 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 NECTIN4Q96NY8 510 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 BLZF1Q9H2G9 400 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 SFXN1Q9H9B4 322 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
LINC00339-207ENST00000634712 FAM189A1O60320 539 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 LDHAP00338 332 aaKnown RBP17.05■□□□□ 0.32
LINC00339-207ENST00000634712 FGFR3P22607 806 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 MCM4P33991 863 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 MTHFRP42898 656 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 SYKP43405 635 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 FAM26FQ5R3K3 315 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 TMC5Q6UXY8 1006 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 C3orf58Q8NDZ4 430 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 LNX1Q8TBB1 728 aaPredicted RBP17.05■□□□□ 0.32
LINC00339-207ENST00000634712 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
LINC00339-207ENST00000634712 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 RPGRIP1Q96KN7 1286 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 IKZF4Q9H2S9 585 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 ASB7Q9H672 318 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 MAN1C1Q9NR34 630 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 TUBGCP4Q9UGJ1 667 aa17.05■□□□□ 0.32
LINC00339-207ENST00000634712 PVALEFA0A1B0GWK0 134 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 I3L4J1 428 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 C1RP00736 705 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 SPATA31D3P0C874 917 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 GARTP22102 1010 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 CASP1P29466 404 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 ADSSP30520 456 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
LINC00339-207ENST00000634712 CUL4BQ13620 913 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 TMEM132DQ14C87 1099 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 JADE1Q6IE81 842 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 CD300LGQ6UXG3 332 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 SPATA31D4Q6ZUB0 917 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 ANKS3Q6ZW76 656 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 FAM213AQ9BRX8 229 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 PLEKHA4Q9H4M7 779 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 CD320Q9NPF0 282 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 DERAQ9Y315 318 aa17.04■□□□□ 0.32
LINC00339-207ENST00000634712 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00339-207ENST00000634712 TGM5O43548 720 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 IL18RAPO95256 599 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 ADRB2P07550 413 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 IGFBP6P24592 240 aaPredicted RBP17.03■□□□□ 0.32
LINC00339-207ENST00000634712 TKTP29401 623 aaKnown RBP17.03■□□□□ 0.32
LINC00339-207ENST00000634712 LRPAP1P30533 357 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 ZBTB6Q15916 424 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 ARMCX5Q6P1M9 558 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 GRAMD1CQ8IYS0 662 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 APPL2Q8NEU8 664 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 PAGE5Q96GU1 130 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 CLSTN3Q9BQT9 956 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 PCIF1Q9H4Z3 704 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 GDPD2Q9HCC8 539 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 TCHHQ07283 1943 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 BDP1A6H8Y1 2624 aa17.03■□□□□ 0.32
LINC00339-207ENST00000634712 CCDC195A0A1B0GUA6 201 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 A0A1W2PQ27 194 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 A0A1W2PQ64 194 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 A0A1W2PQD8 194 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 H7C4K7 107 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 SYN3O14994 580 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 KIAA0391O15091 583 aaKnown RBP17.02■□□□□ 0.32
LINC00339-207ENST00000634712 ACTN4O43707 911 aaKnown RBP17.02■□□□□ 0.32
LINC00339-207ENST00000634712 SPATA1Q5VX52 437 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 KREMEN2Q8NCW0 462 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 SAAL1Q96ER3 474 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 HPSEQ9Y251 543 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 C5orf42Q9H799 3197 aa17.02■□□□□ 0.32
LINC00339-207ENST00000634712 EXTL3O43909 919 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms