RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 APOBEC2Q9Y235 224 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 POLR2DO15514 142 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 SLU7O95391 586 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 ACTN1P12814 892 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 C6P13671 934 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 PAMP19021 973 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 JAK1P23458 1154 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 MAPK4P31152 587 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 MSH2P43246 934 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 TFCP2Q12800 502 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 NFE2L1Q14494 772 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 LRRFIP1Q32MZ4 808 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 USP39Q53GS9 565 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 C15orf52Q6ZUT6 534 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 OVCH2Q7RTZ1 564 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 PIWIL3Q7Z3Z3 882 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 REXO1Q8N1G1 1221 aaKnown RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 ZBTB8BQ8NAP8 495 aaPredicted RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 GOLM1Q8NBJ4 401 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 LINS1Q8NG48 757 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 HTRA1Q92743 480 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 FAXDC2Q96IV6 333 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 ARL5BQ96KC2 179 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 OCSTAMPQ9BR26 566 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 GCOM2Q9BZD3 368 aaPredicted RBP9.21□□□□□ -0.94
CDKL5-206ENST00000623610 SERHL2Q9H4I8 314 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 HDAC6Q9UBN7 1215 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 LRFN2Q9ULH4 789 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 MED16Q9Y2X0 877 aa9.21□□□□□ -0.94
CDKL5-206ENST00000623610 CLRN2A0PK11 232 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 AP3D1O14617 1153 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 MAN1A2O60476 641 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 SRGAP2BP0DMP2 458 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 ZBTB48P10074 688 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 HSPA8P11142 646 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 HPGDP15428 266 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 OR1G1P47890 313 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 MAPK10P53779 464 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 GABPB1Q06547 395 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 CRY1Q16526 586 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 DGKKQ5KSL6 1271 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 ZMYM1Q5SVZ6 1142 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 TTLL7Q6ZT98 887 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 RFX8Q6ZV50 586 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 SAMD7Q7Z3H4 446 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 USHBP1Q8N6Y0 703 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 KCTD6Q8NC69 237 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PPP1R35Q8TAP8 253 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 SH3RF3Q8TEJ3 882 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 FAM216AQ8WUB2 273 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 LENG8Q96PV6 779 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 FERD3LQ96RJ6 166 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 HGH1Q9BTY7 390 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 MMADHCQ9H3L0 296 aaPredicted RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 C15orf41Q9Y2V0 281 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 FAM208AQ9UK61 1670 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 KIF24Q5T7B8 1368 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 DISP2A7MBM2 1401 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PI4KAP2A4QPH2 592 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 EBAG9O00559 213 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA12O60330 932 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 RANBP6O60518 1105 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PDGFAP04085 211 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 CHGBP05060 677 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 HNRNPLP14866 589 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 MYL6P60660 151 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 B2MP61769 119 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 BASP1P80723 227 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 DR1Q01658 176 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 SNX1Q13596 522 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 TUBA3CQ13748 450 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 AUHQ13825 339 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 CFAP221Q4G0U5 840 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 IQSEC1Q6DN90 963 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 VSIG10LQ86VR7 867 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 SLITRK4Q8IW52 837 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 BTN2A2Q8WVV5 523 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 CDCA5Q96FF9 252 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 ZC3H10Q96K80 434 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 ANO10Q9NW15 660 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 ADPRHL2Q9NX46 363 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 ACTR3BQ9P1U1 418 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 SRP68Q9UHB9 627 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 WDR37Q9Y2I8 494 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA9Q9Y5G4 932 aaKnown RBP9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA8Q9Y5G5 932 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA7Q9Y5G6 932 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA6Q9Y5G7 932 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA3Q9Y5H0 932 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 PCDHGA2Q9Y5H1 932 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 NPC1L1Q9UHC9 1359 aa9.2□□□□□ -0.94
CDKL5-206ENST00000623610 hCG_1807616A0A1W2PRN6 198 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 LRRIQ4A6NIV6 560 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 F5H0A9 414 aaPredicted RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 ERAL1O75616 437 aaKnown RBP9.19□□□□□ -0.94
CDKL5-206ENST00000623610 SEC24BO95487 1268 aa9.19□□□□□ -0.94
CDKL5-206ENST00000623610 ITGB1P05556 798 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms