RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 NPHP3-ACAD11A0A0J9YXS1 232 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 POU2F2P09086 479 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 PLS3P13797 630 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 GJB2P29033 226 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 ROR1Q01973 937 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
SNRPA-204ENST00000598452 STRN3Q13033 797 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 SLC10A6Q3KNW5 377 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 PHLDB3Q6NSJ2 640 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 NPAS3Q8IXF0 933 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 SPIRE2Q8WWL2 714 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 KXD1Q9BQD3 176 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 FOXQ1Q9C009 403 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 CNTN3Q9P232 1028 aa20.66■□□□□ 0.9
SNRPA-204ENST00000598452 WDR27A2RRH5 827 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 LRRN2O75325 713 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 TOM1L1O75674 476 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 PLA2G4BP0C869 781 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 POTEHQ6S545 545 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 ZNF461Q8TAF7 563 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 MRPS23Q9Y3D9 190 aaKnown RBP20.65■□□□□ 0.9
SNRPA-204ENST00000598452 SIT1Q9Y3P8 196 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 NUB1Q9Y5A7 615 aa20.65■□□□□ 0.9
SNRPA-204ENST00000598452 H3BQV1 296 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 TBC1D4O60343 1298 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 ABLIM3O94929 683 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 RHOP08100 348 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 MAPTP10636 758 aaKnown RBP20.64■□□□□ 0.89
SNRPA-204ENST00000598452 RPL9P32969 192 aaKnown RBP20.64■□□□□ 0.89
SNRPA-204ENST00000598452 MCM2P49736 904 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 SPAG1Q07617 926 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 SNW1Q13573 536 aaKnown RBP20.64■□□□□ 0.89
SNRPA-204ENST00000598452 NOLC1Q14978 699 aaKnown RBP eCLIP20.64■□□□□ 0.89
SNRPA-204ENST00000598452 SLC5A9Q2M3M2 681 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 TMEM119Q4V9L6 283 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 MTSS1LQ765P7 747 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 RTL10Q7L3V2 364 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 MCRS1Q96EZ8 462 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 CDK5RAP3Q96JB5 506 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 HAPLN2Q9GZV7 340 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 DLGAP2Q9P1A6 1054 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 TUBGCP4Q9UGJ1 667 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 KCNH3Q9ULD8 1083 aa20.64■□□□□ 0.89
SNRPA-204ENST00000598452 CFAP54Q96N23 3096 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 PDCD11Q14690 1871 aaKnown RBP20.63■□□□□ 0.89
SNRPA-204ENST00000598452 PRRG1O14668 218 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 SYN3O14994 580 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 SEC24AO95486 1093 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 ELF1P32519 619 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 SMTNP53814 917 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 MRPL58Q14197 206 aaKnown RBP20.63■□□□□ 0.89
SNRPA-204ENST00000598452 ARSHQ5FYA8 562 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 FBXL5Q9UKA1 691 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 COL4A3Q01955 1670 aa20.63■□□□□ 0.89
SNRPA-204ENST00000598452 ARHGEF37A1IGU5 675 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 CLDN3O15551 220 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 LRG1P02750 347 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 CXCL8P10145 99 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 GLULP15104 373 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 CEBPBP17676 345 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 MCM4P33991 863 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 MATR3P43243 847 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNRPA-204ENST00000598452 STARD6P59095 220 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 CTXN3Q4LDR2 81 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 ZPBP2Q6X784 338 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 PJA1Q8NG27 643 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 LRRC15Q8TF66 581 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 SUSD3Q96L08 255 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 TBC1D32Q96NH3 1257 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 PLA2G2FQ9BZM2 168 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 CYP4F11Q9HBI6 524 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 KCND2Q9NZV8 630 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 DMDP11532 3685 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 VPS13AQ96RL7 3174 aa20.62■□□□□ 0.89
SNRPA-204ENST00000598452 H7C4K7 107 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 SLC26A4O43511 780 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 ATF2P15336 505 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 PTPN2P17706 415 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 MCL1Q07820 350 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 DHX8Q14562 1220 aaKnown RBP20.61■□□□□ 0.89
SNRPA-204ENST00000598452 SLC44A4Q53GD3 710 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 ARL6IP4Q66PJ3 421 aaKnown RBP20.61■□□□□ 0.89
SNRPA-204ENST00000598452 ADSSL1Q8N142 457 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 TCEAL4Q96EI5 215 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 SHDQ96IW2 340 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 CORO1BQ9BR76 489 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 R4GN57 208 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 PTPRZ1P23471 2315 aaPredicted RBP20.61■□□□□ 0.89
SNRPA-204ENST00000598452 NOTCH4Q99466 2003 aa20.61■□□□□ 0.89
SNRPA-204ENST00000598452 H0YCG3 227 aa20.6■□□□□ 0.89
SNRPA-204ENST00000598452 NRG2O14511 850 aaPredicted RBP20.6■□□□□ 0.89
SNRPA-204ENST00000598452 TNFSF9P41273 254 aa20.6■□□□□ 0.89
SNRPA-204ENST00000598452 NCKAP1LP55160 1127 aa20.6■□□□□ 0.89
SNRPA-204ENST00000598452 MLF2Q15773 248 aaPredicted RBP20.6■□□□□ 0.89
SNRPA-204ENST00000598452 HAUS6Q7Z4H7 955 aa20.6■□□□□ 0.89
SNRPA-204ENST00000598452 TCEAL8Q8IYN2 117 aa20.6■□□□□ 0.89
SNRPA-204ENST00000598452 DDX12PQ92771 950 aa20.6■□□□□ 0.89
SNRPA-204ENST00000598452 BICD1Q96G01 975 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms