RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 AGO2Q9UKV8 859 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SNRPAP09012 282 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SDC4P31431 198 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ACAD10Q6JQN1 1059 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 CMTM5Q96DZ9 223 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 GPR101Q96P66 508 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 VPS11Q9H270 941 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 RBAKQ9NYW8 714 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 GPR75-ASB3A0A0A6YYF3 556 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 OSBPP22059 807 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 CNGA3Q16281 694 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 MAPK6Q16659 721 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 ZNF394Q53GI3 561 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 FAM47CQ5HY64 1035 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 ATP8B4Q8TF62 1192 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 SLC24A2Q9UI40 661 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 G3BP2Q9UN86 482 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 HEY1Q9Y5J3 304 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 CLRN2A0PK11 232 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 SHOX2O60902 331 aaPredicted RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 TARSP26639 723 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PTPN4P29074 926 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PPP6R3Q5H9R7 873 aaPredicted RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 SNX25Q9H3E2 840 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 CCDC195A0A1B0GUA6 201 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 RIPK2O43353 540 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 EEF1B2P24534 225 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 TYK2P29597 1187 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 COPB2P35606 906 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PTK7Q13308 1070 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 COBLL1Q53SF7 1204 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 HEATR6Q6AI08 1181 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 C4orf22Q6V702 233 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 C3orf62Q6ZUJ4 267 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PPIL6Q8IXY8 311 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 KIRREL3Q8IZU9 778 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 ACAP3Q96P50 834 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 EHD4Q9H223 541 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 SEMA4AQ9H3S1 761 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 CYP4F11Q9HBI6 524 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 ANLNQ9NQW6 1124 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 DAGLAQ9Y4D2 1042 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PCDHA10Q9Y5I2 948 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 FOXN3O00409 490 aaPredicted RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 EEF1DP29692 281 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 YWHABP31946 246 aaKnown RBP10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PRKCIP41743 596 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 IGBP1P78318 339 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 AP1B1Q10567 949 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 CDO1Q16878 200 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 GJB7Q6PEY0 223 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 THTPAQ9BU02 230 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 OLFML3Q9NRN5 406 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 BFARQ9NZS9 450 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 PCSK1NQ9UHG2 260 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 USP21Q9UK80 565 aa10.93□□□□□ -0.66
PTPRM-205ENST00000577827 GOLGA8RI6L899 631 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 MYBL2P10244 700 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 GIT2Q14161 759 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 MORF4L2Q15014 288 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ZC2HC1CQ53FD0 456 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ARMCX2Q7L311 632 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 NT5DC3Q86UY8 548 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 MTRQ99707 1265 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 C2orf40Q9H1Z8 148 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 LRRC4Q9HBW1 653 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 A0A0U1RQJ8 604 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 DGAT1O75907 488 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 CALB2P22676 271 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 CDH6P55285 790 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ELF3P78545 371 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 GABPAQ06546 454 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 RCN1Q15293 331 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 DUOXA2Q1HG44 320 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 IQCKQ8N0W5 287 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 CCDC124Q96CT7 223 aaKnown RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 SH3GL2Q99962 352 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 PI4K2BG5E9Z4 385 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 SORBS3O60504 671 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 RALAP11233 206 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ITGA4P13612 1032 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 PAMP19021 973 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ALDH18A1P54886 795 aaKnown RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 DRG2P55039 364 aaKnown RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 OCRLQ01968 901 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 OCA2Q04671 838 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ARL13BQ3SXY8 428 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 TMEM119Q4V9L6 283 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ERMARDQ5T6L9 678 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 SETD3Q86TU7 594 aaPredicted RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 SCG3Q8WXD2 468 aaKnown RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 CPA5Q8WXQ8 436 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms