RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PSMD6Q15008 389 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 ARHGAP44Q17R89 818 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 ZBTB41Q5SVQ8 909 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 PRAMEF19Q5SWL8 479 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 ALKBH5Q6P6C2 394 aaKnown RBP14.79□□□□□ -0.04
RNF43-202ENST00000577625 ZBTB8OSQ8IWT0 167 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 METTL13Q8N6R0 699 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 RSRC1Q96IZ7 334 aaKnown RBP14.79□□□□□ -0.04
RNF43-202ENST00000577625 SYT11Q9BT88 431 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 MSTO1Q9BUK6 570 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 C2orf40Q9H1Z8 148 aa14.79□□□□□ -0.04
RNF43-202ENST00000577625 UBE2TQ9NPD8 197 aaPredicted RBP14.79□□□□□ -0.04
RNF43-202ENST00000577625 H3BRB1 525 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.04
RNF43-202ENST00000577625 PRKCBP05771 671 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 MYBL2P10244 700 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 KLRC1P26715 233 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 GPC3P51654 580 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 CLDN10P78369 228 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 IRF5Q13568 498 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 KIF22Q14807 665 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 ALS2CLQ60I27 953 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 C15orf39Q6ZRI6 1047 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 SV2AQ7L0J3 742 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 TAS1R2Q8TE23 839 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 ZNF473Q8WTR7 871 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 ZNF668Q96K58 619 aaPredicted RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 FAM84AQ96KN4 292 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 NLRP4Q96MN2 994 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 MMS19Q96T76 1030 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 MRPL4Q9BYD3 311 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 TUT1Q9H6E5 874 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 HDAC6Q9UBN7 1215 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 SRRM3A6NNA2 597 aaPredicted RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 TULP1O00294 542 aaPredicted RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 FOXN3O00409 490 aaPredicted RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 LDHAP00338 332 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 MATR3P43243 847 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■■□□ 14.7
RNF43-202ENST00000577625 TNFAIP2Q03169 654 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 CRHR2Q13324 411 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 TFDP1Q14186 410 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 RBBP5Q15291 538 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 CCL14Q16627 93 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 MAPK6Q16659 721 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 FAM228AQ86W67 206 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 GSPT2Q8IYD1 628 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 FUKQ8N0W3 1084 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 FBXL13Q8NEE6 735 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 SLC30A5Q8TAD4 765 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 ZNF516Q92618 1163 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 CCDC114Q96M63 670 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 ACO2Q99798 780 aaKnown RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 PACSIN1Q9BY11 444 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 ZFYVE28Q9HCC9 887 aa14.78□□□□□ -0.04
RNF43-202ENST00000577625 TRIP12Q14669 1992 aaPredicted RBP14.78□□□□□ -0.04
RNF43-202ENST00000577625 PTPRJQ12913 1337 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 ABLIM1O14639 778 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 FAM189A1O60320 539 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 TOM1L1O75674 476 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 ZNF865P0CJ78 1059 aaPredicted RBP14.77□□□□□ -0.04
RNF43-202ENST00000577625 LSP1P33241 339 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 PTENP60484 403 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 SREBF2Q12772 1141 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 DGKDQ16760 1214 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.04
RNF43-202ENST00000577625 KAT5Q92993 513 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 ZIC5Q96T25 663 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 RUFY1Q96T51 708 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 HOMER3Q9NSC5 361 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 RAB20Q9NX57 234 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 RBAKQ9NYW8 714 aaPredicted RBP14.77□□□□□ -0.04
RNF43-202ENST00000577625 INTUQ9ULD6 942 aa14.77□□□□□ -0.04
RNF43-202ENST00000577625 GNEQ9Y223 722 aaKnown RBP14.77□□□□□ -0.04
RNF43-202ENST00000577625 MAGEB2O15479 319 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 CLDN3O15551 220 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 ASAP2O43150 1006 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 BUB1O43683 1085 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 PRLRP16471 622 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 IBSPP21815 317 aaPredicted RBP14.77□□□□□ -0.05
RNF43-202ENST00000577625 TTMPQ5BVD1 217 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.05
RNF43-202ENST00000577625 C6orf89Q6UWU4 347 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 KDM7AQ6ZMT4 941 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 KREMEN1Q96MU8 473 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 FZD8Q9H461 694 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 MINDY3Q9H8M7 445 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.77□□□□□ -0.05
RNF43-202ENST00000577625 GJD2Q9UKL4 321 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 PCDHGC5Q9Y5F6 944 aa14.77□□□□□ -0.05
RNF43-202ENST00000577625 CNTNAP2Q9UHC6 1331 aa14.76□□□□□ -0.05
RNF43-202ENST00000577625 ZMYND10O75800 440 aa14.76□□□□□ -0.05
RNF43-202ENST00000577625 SNUPNO95149 360 aaKnown RBP14.76□□□□□ -0.05
RNF43-202ENST00000577625 HARSP12081 509 aaKnown RBP14.76□□□□□ -0.05
RNF43-202ENST00000577625 MBTD1Q05BQ5 628 aa14.76□□□□□ -0.05
RNF43-202ENST00000577625 EMC10Q5UCC4 262 aa14.76□□□□□ -0.05
RNF43-202ENST00000577625 OLFML2BQ68BL8 750 aa14.76□□□□□ -0.05
RNF43-202ENST00000577625 SND1Q7KZF4 910 aaKnown RBP eCLIP14.76□□□□□ -0.05
RNF43-202ENST00000577625 MICAL1Q8TDZ2 1067 aa14.76□□□□□ -0.05
RNF43-202ENST00000577625 LENG1Q96BZ8 264 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms