RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 PTPRDP23468 1912 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 AKAP5P24588 427 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 CCNE1P24864 410 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 YWHABP31946 246 aaKnown RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 FCHO2Q0JRZ9 810 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 SRSF5Q13243 272 aaKnown RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 GRM2Q14416 872 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 FAM187BQ17R55 369 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 PSAPL1Q6NUJ1 521 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 RALGPS2Q86X27 583 aaPredicted RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 GJA10Q969M2 543 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 ARRDC1-AS1Q9H2J1 176 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 XPNPEP1Q9NQW7 623 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 VAV3Q9UKW4 847 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 TNRC6BQ9UPQ9 1833 aaKnown RBP11.22□□□□□ -0.61
CHMP6-203ENST00000572525 CDY1Q9Y6F8 540 aa11.22□□□□□ -0.61
CHMP6-203ENST00000572525 CASTOR2A6NHX0 329 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 M0R2N6 131 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 TAF4O00268 1085 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 EML1O00423 815 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 TBX3O15119 743 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 TDP2O95551 362 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 CEACAM1P13688 526 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 CSRP1P21291 193 aaKnown RBP11.21□□□□□ -0.61
CHMP6-203ENST00000572525 MPLP40238 635 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 AKAP17AQ02040 695 aaKnown RBP11.21□□□□□ -0.61
CHMP6-203ENST00000572525 CAPSQ13938 189 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 CCINQ13939 588 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 KRT32Q14532 448 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 NTRK3Q16288 839 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 TPGS2Q68CL5 300 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 RNF43Q68DV7 783 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 PDZD4Q76G19 769 aaPredicted RBP11.21□□□□□ -0.61
CHMP6-203ENST00000572525 FBXL16Q8N461 479 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
CHMP6-203ENST00000572525 CSGALNACT1Q8TDX6 532 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 HASPINQ8TF76 798 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
CHMP6-203ENST00000572525 UROC1Q96N76 676 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 LXNQ9BS40 222 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 ZSWIM4Q9H7M6 989 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 KCNMB3Q9NPA1 279 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 WRAP73Q9P2S5 460 aaPredicted RBP11.21□□□□□ -0.61
CHMP6-203ENST00000572525 PARP2Q9UGN5 583 aa11.21□□□□□ -0.61
CHMP6-203ENST00000572525 KALRNO60229 2985 aa11.21□□□□□ -0.62
CHMP6-203ENST00000572525 CEP192Q8TEP8 1941 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 AXIN1O15169 862 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 RPP40O75818 363 aaKnown RBP11.2□□□□□ -0.62
CHMP6-203ENST00000572525 DGAT1O75907 488 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 LYPLA2O95372 231 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 NPTXRO95502 500 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
CHMP6-203ENST00000572525 IFNAR1P17181 557 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 ELF1P32519 619 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 CTHP32929 405 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 ARL2P36404 184 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 NOVA1P51513 510 aaKnown RBP11.2□□□□□ -0.62
CHMP6-203ENST00000572525 ROR1Q01973 937 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 EPHA7Q15375 998 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 XKR9Q5GH70 373 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 CYP4A22Q5TCH4 519 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 DAB2IPQ5VWQ8 1189 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 GALNT17Q6IS24 598 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 DAGLBQ8NCG7 672 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 RABGGTAQ92696 567 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 PRMT7Q9NVM4 692 aaPredicted RBP11.2□□□□□ -0.62
CHMP6-203ENST00000572525 OBP2AQ9NY56 170 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 KLK14Q9P0G3 267 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 PCDHA4Q9UN74 947 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 INSL5Q9Y5Q6 135 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 OBSL1O75147 1896 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 NAV2Q8IVL1 2488 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 GON4LQ3T8J9 2241 aa11.2□□□□□ -0.62
CHMP6-203ENST00000572525 SPECC1L-ADORA2AF8WAN1 911 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 PRRG1O14668 218 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 SYN3O14994 580 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 N4BP3O15049 544 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 CCR2P41597 374 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
CHMP6-203ENST00000572525 RING1Q06587 406 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 WDR44Q5JSH3 913 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 HEATR6Q6AI08 1181 aaKnown RBP11.19□□□□□ -0.62
CHMP6-203ENST00000572525 PPP4R3AQ6IN85 833 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 IQCEQ6IPM2 695 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 Q6ZS52 159 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 TCEAL4Q96EI5 215 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 CORO1BQ9BR76 489 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 ANKEF1Q9NU02 776 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 CACNG4Q9UBN1 327 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 DDX25Q9UHL0 483 aaKnown RBP11.19□□□□□ -0.62
CHMP6-203ENST00000572525 NEUROG3Q9Y4Z2 214 aa11.19□□□□□ -0.62
CHMP6-203ENST00000572525 APC2O95996 2303 aa11.18□□□□□ -0.62
CHMP6-203ENST00000572525 HEPACAM2A8MVW5 462 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms