RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 GCC2Q8IWJ2 1684 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 SLIT1O75093 1534 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 MED14O60244 1454 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 FAM171A2A8MVW0 826 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 GABRDO14764 452 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 AKAP8O43823 692 aaKnown RBP5.35□□□□□ -1.55
NUP88-202ENST00000570937 FSHBP01225 129 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 GSPT1P15170 499 aaKnown RBP5.35□□□□□ -1.55
NUP88-202ENST00000570937 MGAT1P26572 445 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 PTPN7P35236 360 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 SEPT2Q15019 361 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 PGM2L1Q6PCE3 622 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 PQLC1Q8N2U9 271 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.35□□□□□ -1.55
NUP88-202ENST00000570937 JADE3Q92613 823 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 CYFIP2Q96F07 1278 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 MKS1Q9NXB0 559 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 SIK3Q9Y2K2 1263 aa5.35□□□□□ -1.55
NUP88-202ENST00000570937 CFAP65Q6ZU64 1925 aaKnown RBP5.35□□□□□ -1.55
NUP88-202ENST00000570937 KDM5AP29375 1690 aaKnown RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 RPGRIP1LQ68CZ1 1315 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 ZNF335Q9H4Z2 1342 aaPredicted RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 SHTN1A0MZ66 631 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 CXorf49A8MYA2 514 aaPredicted RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 DIRC3C9JPN6 131 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 WNT10BO00744 389 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 KATNA1O75449 491 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 RECQL4O94761 1208 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 ZNF202O95125 648 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 SNRPA1P09661 255 aaKnown RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 IL2RBP14784 551 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 MCM7P33993 719 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 SLC6A9P48067 706 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 ITKQ08881 620 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 ABHD18Q0P651 414 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 NOMO1Q15155 1222 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 PTPROQ16827 1216 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 SYT12Q8IV01 421 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 AMER2Q8N7J2 671 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 REPS2Q8NFH8 660 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 ZNF483Q8TF39 744 aaPredicted RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 SLC25A43Q8WUT9 341 aaPredicted RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 CASKIN2Q8WXE0 1202 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 FUBP3Q96I24 572 aaKnown RBP eCLIP5.34□□□□□ -1.55
NUP88-202ENST00000570937 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 DCLRE1CQ96SD1 692 aaKnown RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 SCAND2PQ9GZW5 306 aaPredicted RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 CCDC8Q9H0W5 538 aaPredicted RBP5.34□□□□□ -1.55
NUP88-202ENST00000570937 LANCL2Q9NS86 450 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 GPRC5BQ9NZH0 403 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 SRRDQ9UH36 339 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 SORCS3Q9UPU3 1222 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 CHST2Q9Y4C5 530 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 HS3ST3A1Q9Y663 406 aa5.34□□□□□ -1.55
NUP88-202ENST00000570937 PIK3C2BO00750 1634 aa5.34□□□□□ -1.56
NUP88-202ENST00000570937 ADGRB3O60242 1522 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 ARHGAP23Q9P227 1491 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 RAB3GAP2Q9H2M9 1393 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 KLHL33A6NCF5 533 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 AHRRA9YTQ3 701 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCDHGA12O60330 932 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 TOM1O60784 492 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 FAM20BO75063 409 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 MT-CO1P00395 513 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 MAKP20794 623 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PTGS2P35354 604 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PER3P56645 1201 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 CLRN1P58418 232 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 EVA1CP58658 441 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 CLUL1Q15846 466 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 OTUD7BQ6GQQ9 843 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 EFCAB12Q6NXP0 572 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 RHOUQ7L0Q8 258 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 ZNF276Q8N554 614 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 OR10H5Q8NGA6 315 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 OR2I1PQ8NGU4 316 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 ZFP28Q8NHY6 868 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 SLC35B2Q8TB61 432 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 LENG9Q96B70 501 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 MTMR8Q96EF0 704 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 UHRF1Q96T88 793 aaPredicted RBP5.33□□□□□ -1.56
NUP88-202ENST00000570937 SLC46A2Q9BY10 475 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 SLC13A1Q9BZW2 595 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCED1AQ9H1Q7 454 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 SPON1Q9HCB6 807 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 MOCS1Q9NZB8 636 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 TUBD1Q9UJT1 453 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 SPEF1Q9Y4P9 236 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCDHGA9Q9Y5G4 932 aaKnown RBP5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCDHGA8Q9Y5G5 932 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCDHGA7Q9Y5G6 932 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCDHGA6Q9Y5G7 932 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 PCDHGA3Q9Y5H0 932 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 UBR1Q8IWV7 1749 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 E9PCH4 1651 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 SYNMO15061 1565 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 CPS1P31327 1500 aa5.33□□□□□ -1.56
NUP88-202ENST00000570937 IQSEC2Q5JU85 1478 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms