RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 INPPL1O15357 1258 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 BNIP3LO60238 219 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 CSDE1O75534 798 aaKnown RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 FGFR4P22455 802 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 HOXA11P31270 313 aaPredicted RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 PRPHP41219 470 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 KRT17Q04695 432 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 NCBP1Q09161 790 aaKnown RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 HYAL1Q12794 435 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 PSMD2Q13200 908 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 ZNF174Q15697 407 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 RILPL1Q5EBL4 403 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 SPOUT1Q5T280 376 aaKnown RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 HAUS3Q68CZ6 603 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 TWF2Q6IBS0 349 aaKnown RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 KCNT2Q6UVM3 1135 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 TMEM184AQ6ZMB5 413 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 LRRC69Q6ZNQ3 347 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 NLRP8Q86W28 1048 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 FAM178BQ8IXR5 827 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 THNSL1Q8IYQ7 743 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 RNF149Q8NC42 400 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 MCPH1Q8NEM0 835 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 MRPS27Q92552 414 aaKnown RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 TMX3Q96JJ7 454 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 SCYL1Q96KG9 808 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 ZNF558Q96NG5 402 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 TBC1D32Q96NH3 1257 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 CITED4Q96RK1 184 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 RAB34Q9BZG1 259 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 UBN1Q9NPG3 1134 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 NDFIP2Q9NV92 336 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 KANSL3Q9P2N6 904 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 STK39Q9UEW8 545 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 PRKAG3Q9UGI9 489 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 PIN4Q9Y237 131 aaKnown RBP8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 COMMD10Q9Y6G5 202 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 CNTNAP2Q9UHC6 1331 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 MYH11P35749 1972 aa8.42□□□□□ -1.06
AP003071.2-201ENST00000562772 TRIP11Q15643 1979 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 ZMYM2Q9UBW7 1377 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 MED24O75448 989 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 OFD1O75665 1012 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 EYA4O95677 639 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 SRGAP2CP0DJJ0 459 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 GLRA2P23416 452 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 IRS1P35568 1242 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 TECP42680 631 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 ALDH7A1P49419 539 aaKnown RBP8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 TOB1P50616 345 aaPredicted RBP8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 COASYQ13057 564 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 CAPSQ13938 189 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 UBXN11Q5T124 520 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 GLB1LQ6UWU2 654 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 KRBA2Q6ZNG9 492 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 SLC39A11Q8N1S5 342 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 IGSF22Q8N9C0 903 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 HELQQ8TDG4 1101 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 ABHD17AQ96GS6 310 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 HSH2DQ96JZ2 352 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 PKNOX2Q96KN3 472 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 CCDC43Q96MW1 224 aaKnown RBP8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 MINDY3Q9H8M7 445 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 NGRNQ9NPE2 291 aaKnown RBP8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 CLDND1Q9NY35 253 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 SPG21Q9NZD8 308 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 PCDHB2Q9Y5E7 798 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 IRAK3Q9Y616 596 aa8.41□□□□□ -1.06
AP003071.2-201ENST00000562772 A0A1B0GUA9 196 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 TSPAN1O60635 241 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 ERLIN2O94905 339 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 CYP11B2P19099 503 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 ERVFC1P60507 584 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 MBTD1Q05BQ5 628 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 FOXD4Q12950 439 aaPredicted RBP8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 KCNC3Q14003 757 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 SMAD2Q15796 467 aaKnown RBP8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 DUSP6Q16828 381 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 FAM187BQ17R55 369 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 NOMO2Q5JPE7 1267 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 NOTUMQ6P988 496 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 FOXR1Q6PIV2 292 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 RNF169Q8NCN4 708 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 ASAP3Q8TDY4 903 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 PIGOQ8TEQ8 1089 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 MSLNLQ96KJ4 702 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 NECAB3Q96P71 396 aaPredicted RBP8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 TMEM175Q9BSA9 504 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 MKNK1Q9BUB5 465 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 C1QTNF1Q9BXJ1 281 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 FZD8Q9H461 694 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 TBC1D13Q9NVG8 400 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 LRWD1Q9UFC0 647 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 PCDHGC4Q9Y5F7 938 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 MYO10Q9HD67 2058 aa8.4□□□□□ -1.06
AP003071.2-201ENST00000562772 MTCL1Q9Y4B5 1905 aaKnown RBP8.39□□□□□ -1.07
AP003071.2-201ENST00000562772 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
AP003071.2-201ENST00000562772 H3BQ06 376 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms