RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ALS2CLQ60I27 953 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 NCAPH2Q6IBW4 605 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF530Q6P9A1 599 aaPredicted RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 Q6ZUG5 572 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 UBE3BQ7Z3V4 1068 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 VSIG1Q86XK7 387 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 RPGRIP1Q96KN7 1286 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 YME1L1Q96TA2 773 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 SLF1Q9BQI6 1058 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 NOP53Q9NZM5 478 aaKnown RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 BAIAP2L1Q9UHR4 511 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF214Q9UL59 606 aaPredicted RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 AQP12BA6NM10 295 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 MEIS3P2A8K0S8 358 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 F8W8V4 182 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 ATE1O95260 518 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 NPTXRO95502 500 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 PSMA5P28066 241 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 CDC25CP30307 473 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 SLC12A2P55011 1212 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 EIF4A1P60842 406 aaKnown RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 PSMC1P62191 440 aaKnown RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 SRSF2Q01130 221 aaKnown RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 CNN3Q15417 329 aaKnown RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 HSF5Q4G112 596 aaPredicted RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 C1orf141Q5JVX7 400 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM192Q8IY95 271 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 CNTROBQ8N137 903 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM102Q8N9M5 508 aaPredicted RBP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 TAF4BQ92750 862 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 SLC5A5Q92911 643 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 ARL8AQ96BM9 186 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 CYFIP2Q96F07 1278 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 FTOQ9C0B1 505 aaKnown RBP eCLIP7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 SUN2Q9UH99 717 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 SCN11AQ9UI33 1791 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 TNS3Q68CZ2 1445 aa7.23□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A0U1RQJ8 604 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 A0A1B0GVG6 124 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PRAMEF27A3QJZ7 478 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 FAM227AF5H4B4 570 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 RNMTO43148 476 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 CNOT4O95628 575 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 CSTBP04080 98 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 GHRP10912 638 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 KRT10P13645 584 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 MAGEA10P43363 369 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 NDUFA8P51970 172 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 KPNA1P52294 538 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 GABREP78334 506 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PTH1RQ03431 593 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TEFQ10587 303 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 NECTIN1Q15223 517 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 FAM26FQ5R3K3 315 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ADALQ6DHV7 355 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 CIAPIN1Q6FI81 312 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 RAD9BQ6WBX8 426 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 GSPT2Q8IYD1 628 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TEX9Q8N6V9 391 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM145Q8NBT3 493 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 UHMK1Q8TAS1 419 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 USP28Q96RU2 1077 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 GMIPQ9P107 970 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ADD3Q9UEY8 706 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TUBD1Q9UJT1 453 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 FAM170AA1A519 330 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PGPEP1LA6NFU8 196 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 BTBD11A6QL63 1104 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 STXBP3O00186 592 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ATP6V1G1O75348 118 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 UBXN7O94888 489 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 KCNH1O95259 989 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TNFRSF6BO95407 300 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 CFBP00751 764 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 GNAI2P04899 355 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ITGA6P23229 1130 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ITPKAP23677 461 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 MAPK4P31152 587 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 DRG2P55039 364 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 KIF23Q02241 960 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PPARDQ03181 441 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PPP2R5DQ14738 602 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 MYBPC3Q14896 1274 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 RNF220Q5VTB9 566 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TRAPPC11Q7Z392 1133 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 MTDHQ86UE4 582 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 OR8H1Q8NGG4 311 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 RUFY2Q8WXA3 655 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 HTRA1Q92743 480 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 USP13Q92995 863 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 FAM193BQ96PV7 902 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 LMAN2LQ9H0V9 348 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PCDHA7Q9UN72 937 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PXDNQ92626 1479 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 GPR75-ASB3A0A0A6YYF3 556 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 CBX4O00257 560 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ABLIM1O14639 778 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 JAK2O60674 1132 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 SASH1O94885 1247 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms