RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 CCL16O15467 120 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 PI15O43692 258 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 TBC1D4O60343 1298 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 JAK2O60674 1132 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 N4BP1O75113 896 aaKnown RBP13.66□□□□□ -0.22
CDK4-214ENST00000552862 ABLIM3O94929 683 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 CLTAP09496 248 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 MATR3P43243 847 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDK4-214ENST00000552862 NPTX2P47972 431 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 CLCNKBP51801 687 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 ARHGAP8P85298 464 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDK4-214ENST00000552862 ALKAL1Q6UXT8 129 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
CDK4-214ENST00000552862 KCNN1Q92952 543 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 CALML4Q96GE6 196 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
CDK4-214ENST00000552862 TRMT61BQ9BVS5 477 aaKnown RBP13.66□□□□□ -0.22
CDK4-214ENST00000552862 SPATA6Q9NWH7 488 aaPredicted RBP13.66□□□□□ -0.22
CDK4-214ENST00000552862 ARHGAP28Q9P2N2 729 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 RAB23Q9ULC3 237 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 ODF2LQ9ULJ1 636 aa13.66□□□□□ -0.22
CDK4-214ENST00000552862 MTCL1Q9Y4B5 1905 aaKnown RBP13.65□□□□□ -0.22
CDK4-214ENST00000552862 FAM170BA6NMN3 283 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 H3BQV1 296 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 PODXLO00592 558 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
CDK4-214ENST00000552862 PLS3P13797 630 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
CDK4-214ENST00000552862 ALDH1A3P47895 512 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 GPC5P78333 572 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 AMPD2Q01433 879 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 NAB2Q15742 525 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 ITIH5Q86UX2 942 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 CCDC83Q8IWF9 413 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 B3GALT6Q96L58 329 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 BRD9Q9H8M2 597 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 CYP4F11Q9HBI6 524 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 CNTN3Q9P232 1028 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 AFF4Q9UHB7 1163 aaKnown RBP13.65□□□□□ -0.22
CDK4-214ENST00000552862 DSEQ9UL01 958 aa13.65□□□□□ -0.22
CDK4-214ENST00000552862 UBQLN1Q9UMX0 589 aaKnown RBP13.65□□□□□ -0.22
CDK4-214ENST00000552862 OR6C75A6NL08 312 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 RHOP08100 348 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 SP9P0CG40 484 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 MCM4P33991 863 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 CNR2P34972 360 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 UBA7P41226 1012 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 EPHB3P54753 998 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 GUCY1B3Q02153 619 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 YWHAHQ04917 246 aaPredicted RBP13.64□□□□□ -0.23
CDK4-214ENST00000552862 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDK4-214ENST00000552862 UBXN2BQ14CS0 331 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 RABEP1Q15276 862 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 CTXN3Q4LDR2 81 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 SPECC1Q5M775 1068 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
CDK4-214ENST00000552862 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 SLFN12LQ6IEE8 588 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 RINT1Q6NUQ1 792 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 PARM1Q6UWI2 310 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 YAF2Q8IY57 180 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 SYT2Q8N9I0 419 aaPredicted RBP13.64□□□□□ -0.23
CDK4-214ENST00000552862 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 SUSD3Q96L08 255 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 ASAH2Q9NR71 780 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 ZSCAN32Q9NX65 697 aa13.64□□□□□ -0.23
CDK4-214ENST00000552862 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
CDK4-214ENST00000552862 SOBPA7XYQ1 873 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 HIP1RO75146 1068 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 PSMC3P17980 439 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
CDK4-214ENST00000552862 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 SNW1Q13573 536 aaKnown RBP13.63□□□□□ -0.23
CDK4-214ENST00000552862 LRRC32Q14392 662 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 C1orf186Q6ZWK4 172 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 NPAS3Q8IXF0 933 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 CCDC26Q8TAB7 109 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 FGF14Q92915 247 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 SMARCD2Q92925 531 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 CLDN23Q96B33 292 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 BICD1Q96G01 975 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 PAAF1Q9BRP4 392 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 CDT1Q9H211 546 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 C8orf33Q9H7E9 229 aaPredicted RBP13.63□□□□□ -0.23
CDK4-214ENST00000552862 DNMT3BQ9UBC3 853 aaKnown RBP13.63□□□□□ -0.23
CDK4-214ENST00000552862 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 DENND4AQ7Z401 1863 aa13.63□□□□□ -0.23
CDK4-214ENST00000552862 RIF1Q5UIP0 2472 aaKnown RBP13.62□□□□□ -0.23
CDK4-214ENST00000552862 ZNF263O14978 683 aa13.62□□□□□ -0.23
CDK4-214ENST00000552862 OAZ2O95190 189 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms