RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 ARHGAP28Q9P2N2 729 aa15.58■□□□□ 0.08
TPCN1-213ENST00000550543 CACNG4Q9UBN1 327 aa15.58■□□□□ 0.08
TPCN1-213ENST00000550543 EP300Q09472 2414 aaPredicted RBP15.58■□□□□ 0.08
TPCN1-213ENST00000550543 USP34Q70CQ2 3546 aa15.58■□□□□ 0.08
TPCN1-213ENST00000550543 TTLL13PA6NNM8 815 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 PODXLO00592 558 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 ATF2P15336 505 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 PAX3P23760 479 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 U2AF2P26368 475 aaKnown RBP eCLIP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 MARCKSP29966 332 aaPredicted RBP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 ABCD1P33897 745 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 RPS9P46781 194 aaKnown RBP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 SNW1Q13573 536 aaKnown RBP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 VARS2Q5ST30 1063 aaKnown RBP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 C1orf228Q6PIY5 440 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 ALKAL1Q6UXT8 129 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 DTHD1Q6ZMT9 781 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 ITFG1Q8TB96 612 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 SPIRE2Q8WWL2 714 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 E2F7Q96AV8 911 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 KIFC3Q9BVG8 833 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 FOXQ1Q9C009 403 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 GPR88Q9GZN0 384 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 CDT1Q9H211 546 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 CNTN3Q9P232 1028 aa15.57■□□□□ 0.08
TPCN1-213ENST00000550543 DNMT3BQ9UBC3 853 aaKnown RBP15.57■□□□□ 0.08
TPCN1-213ENST00000550543 FAM170BA6NMN3 283 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 ADAM12O43184 909 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 SLC26A4O43511 780 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 XPOTO43592 962 aaKnown RBP15.56■□□□□ 0.08
TPCN1-213ENST00000550543 DTNBO60941 627 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 HIP1RO75146 1068 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 TOM1L1O75674 476 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 ABLIM3O94929 683 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 GUCY2CP25092 1073 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 NTHL1P78549 312 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 ROR1Q01973 937 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 PTGDRQ13258 359 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 PLD1Q13393 1074 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 PUM1Q14671 1186 aaKnown RBP eCLIP15.56■□□□□ 0.08
TPCN1-213ENST00000550543 ZPBP2Q6X784 338 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 PDZD4Q76G19 769 aaPredicted RBP15.56■□□□□ 0.08
TPCN1-213ENST00000550543 MSANTD3Q96H12 275 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 NTPCRQ9BSD7 190 aaKnown RBP15.56■□□□□ 0.08
TPCN1-213ENST00000550543 PLEKHA5Q9HAU0 1116 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 ZFP14Q9HCL3 533 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 PTPRHQ9HD43 1115 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 LTB4R2Q9NPC1 389 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 R4GN57 208 aa15.56■□□□□ 0.08
TPCN1-213ENST00000550543 NRLP54845 237 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
TPCN1-213ENST00000550543 CTXN3Q4LDR2 81 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 RILPL1Q5EBL4 403 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 C4orf32Q8N8J7 132 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 DEPDC1BQ8WUY9 529 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 IRF7Q92985 503 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 CLDN23Q96B33 292 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 SUSD3Q96L08 255 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 ZNF512Q96ME7 567 aaPredicted RBP15.55■□□□□ 0.08
TPCN1-213ENST00000550543 KXD1Q9BQD3 176 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 RPP25Q9BUL9 199 aaKnown RBP15.55■□□□□ 0.08
TPCN1-213ENST00000550543 CYP4F11Q9HBI6 524 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 TRPV5Q9NQA5 729 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 AFF4Q9UHB7 1163 aaKnown RBP15.55■□□□□ 0.08
TPCN1-213ENST00000550543 CFAP54Q96N23 3096 aa15.55■□□□□ 0.08
TPCN1-213ENST00000550543 CLDN3O15551 220 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 GLULP15104 373 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 PROZP22891 400 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 MCM4P33991 863 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 BRCC3P46736 316 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 ADCY1Q08828 1119 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 RINT1Q6NUQ1 792 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 TPRG1Q6ZUI0 275 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 TRMT61BQ9BVS5 477 aaKnown RBP15.54■□□□□ 0.08
TPCN1-213ENST00000550543 TARS2Q9BW92 718 aaKnown RBP15.54■□□□□ 0.08
TPCN1-213ENST00000550543 BRD9Q9H8M2 597 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 HCFC1R1Q9NWW0 138 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 ZSCAN32Q9NX65 697 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 LARSQ9P2J5 1176 aaKnown RBP15.54■□□□□ 0.08
TPCN1-213ENST00000550543 NCDNQ9UBB6 729 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 INSL5Q9Y5Q6 135 aa15.54■□□□□ 0.08
TPCN1-213ENST00000550543 TBC1D4O60343 1298 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 FGF19O95750 216 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 EDN1P05305 212 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 CLTAP09496 248 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 PLS3P13797 630 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 CYP3A5P20815 502 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 MLLT6P55198 1093 aaPredicted RBP15.53■□□□□ 0.08
TPCN1-213ENST00000550543 OSTNP61366 133 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 ST3GAL1Q11201 340 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
TPCN1-213ENST00000550543 ECM1Q16610 540 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 MAMSTRQ6ZN01 415 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 C1orf186Q6ZWK4 172 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 DGLUCYQ7Z3D6 616 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 USP37Q86T82 979 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 ING5Q8WYH8 240 aa15.53■□□□□ 0.08
TPCN1-213ENST00000550543 SMARCD2Q92925 531 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms