RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 HACE1Q8IYU2 909 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 TRIM58Q8NG06 486 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF592Q92610 1267 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 GLT1D1Q96MS3 346 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 OSMRQ99650 979 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 CHST12Q9NRB3 414 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 ADAMTS1Q9UHI8 967 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 NAGPAQ9UK23 515 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 SQORQ9Y6N5 450 aa13.52□□□□□ -0.25
CACNB3-217ENST00000550483 SCN10AQ9Y5Y9 1956 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 A0A0A6YYK5 440 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-217ENST00000550483 CTAGE9A4FU28 777 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 FOXN3O00409 490 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-217ENST00000550483 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
CACNB3-217ENST00000550483 H2AFZP0C0S5 128 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 GZMAP12544 262 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 TNFAIP3P21580 790 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 GFPT1Q06210 699 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-217ENST00000550483 PTK7Q13308 1070 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 CUL2Q13617 745 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 H2AFVQ71UI9 128 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 NOX5Q96PH1 765 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 SYT11Q9BT88 431 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-217ENST00000550483 NIF3L1Q9GZT8 377 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 VRTNQ9H8Y1 702 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 AJAP1Q9UKB5 411 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-217ENST00000550483 ITGA11Q9UKX5 1188 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 NENFQ9UMX5 172 aa13.51□□□□□ -0.25
CACNB3-217ENST00000550483 A0A087X0T9 212 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF263O14978 683 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 GPR182O15218 404 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 VNN1O95497 513 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 INHAP05111 366 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 FAM228BP0C875 321 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 CXCL8P10145 99 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 TUBB4BP68371 445 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 TFAMQ00059 246 aaKnown RBP13.5□□□□□ -0.25
CACNB3-217ENST00000550483 CYP27A1Q02318 531 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 TRIM32Q13049 653 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 TMEM132DQ14C87 1099 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 FAM47CQ5HY64 1035 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 TRIM72Q6ZMU5 477 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 OR5B17Q8NGF7 314 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 SLC30A5Q8TAD4 765 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 CPB2Q96IY4 423 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF668Q96K58 619 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-217ENST00000550483 KREMEN1Q96MU8 473 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 NAPGQ99747 312 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-217ENST00000550483 AGPAT1Q99943 283 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 GUCA1BQ9UMX6 200 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 CNTN6Q9UQ52 1028 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 GINS2Q9Y248 185 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
CACNB3-217ENST00000550483 PTPRJQ12913 1337 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 SOX1O00570 391 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-217ENST00000550483 LRRN2O75325 713 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-217ENST00000550483 ACLYP53396 1101 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 RBP5P82980 135 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 MTFR1Q15390 333 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF699Q32M78 642 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 GDF6Q6KF10 455 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-217ENST00000550483 EPS8L1Q8TE68 723 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 PPP1R16BQ96T49 567 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 DNAI2Q9GZS0 605 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 CYP3A43Q9HB55 503 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
CACNB3-217ENST00000550483 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 UNC80Q8N2C7 3258 aa13.49□□□□□ -0.25
CACNB3-217ENST00000550483 LACTBL1A8MY62 500 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 NPTXRO95502 500 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 TMEM253P0C7T8 217 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 SKIP12755 728 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 CYP11B1P15538 503 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 ATF7P17544 494 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 USP8P40818 1118 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 RAB27AP51159 221 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 WNT7BP56706 349 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 CDR2Q01850 454 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 HIC1Q14526 733 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 PTGISQ16647 500 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms