RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 KREMEN1Q96MU8 473 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 NAPGQ99747 312 aaPredicted RBP13.5□□□□□ -0.25
CACNB3-212ENST00000549971 AGPAT1Q99943 283 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 TSKSQ9UJT2 592 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 GUCA1BQ9UMX6 200 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 CNTN6Q9UQ52 1028 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 GINS2Q9Y248 185 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 PCDHB2Q9Y5E7 798 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
CACNB3-212ENST00000549971 PTPRJQ12913 1337 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 LRRN2O75325 713 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-212ENST00000549971 ACLYP53396 1101 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 RBP5P82980 135 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 ZNF699Q32M78 642 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 COL13A1Q5TAT6 717 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-212ENST00000549971 GDF6Q6KF10 455 aaPredicted RBP13.49□□□□□ -0.25
CACNB3-212ENST00000549971 EPS8L1Q8TE68 723 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 PPP1R16BQ96T49 567 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 DNAI2Q9GZS0 605 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 CYP3A43Q9HB55 503 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
CACNB3-212ENST00000549971 NOD1Q9Y239 953 aa13.49□□□□□ -0.25
CACNB3-212ENST00000549971 LACTBL1A8MY62 500 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 DDX3XO00571 662 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 NPTXRO95502 500 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 TMEM253P0C7T8 217 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 SKIP12755 728 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 CYP11B1P15538 503 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 ATF7P17544 494 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 USP8P40818 1118 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 RAB27AP51159 221 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 WNT7BP56706 349 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 CDR2Q01850 454 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 ITGA7Q13683 1181 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 HIC1Q14526 733 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 TCEAL1Q15170 157 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 PTGISQ16647 500 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 SLC10A6Q3KNW5 377 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 EFCAB13Q8IY85 973 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 CEP120Q8N960 986 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 MYRIPQ8NFW9 859 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 CTNNBL1Q8WYA6 563 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 TRIM11Q96F44 468 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 SNX27Q96L92 541 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 UBQLN1Q9UMX0 589 aaKnown RBP13.48□□□□□ -0.25
CACNB3-212ENST00000549971 JRKLQ9Y4A0 524 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
CACNB3-212ENST00000549971 EVPLQ92817 2033 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 A0A0U1RQG5 324 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-212ENST00000549971 ANKRD62A6NC57 917 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 RTN2O75298 545 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 RPS6KA5O75582 802 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 CLSTN1O94985 981 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 CD4P01730 458 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 KRT5P13647 590 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 CYP3A5P20815 502 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNB3-212ENST00000549971 OSTNP61366 133 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-212ENST00000549971 CAP1Q01518 475 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 JADE1Q6IE81 842 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 GLYCTKQ8IVS8 523 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 RHOT2Q8IXI1 618 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 TNS4Q8IZW8 715 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 SYCE1Q8N0S2 351 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
CACNB3-212ENST00000549971 TATDN2Q93075 761 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 LACRTQ9GZZ8 138 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNB3-212ENST00000549971 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
CACNB3-212ENST00000549971 PHF24Q9UPV7 400 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 TRIM17Q9Y577 477 aa13.47□□□□□ -0.25
CACNB3-212ENST00000549971 NCANO14594 1321 aa13.46□□□□□ -0.25
CACNB3-212ENST00000549971 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CACNB3-212ENST00000549971 CSDE1O75534 798 aaKnown RBP13.46□□□□□ -0.25
CACNB3-212ENST00000549971 URI1O94763 535 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-212ENST00000549971 NFICP08651 508 aa13.46□□□□□ -0.25
CACNB3-212ENST00000549971 MYBL1P10243 752 aa13.46□□□□□ -0.25
CACNB3-212ENST00000549971 KCNE1P15382 129 aa13.46□□□□□ -0.25
CACNB3-212ENST00000549971 PRLRP16471 622 aa13.46□□□□□ -0.25
CACNB3-212ENST00000549971 CAPN2P17655 700 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms