RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 MTMR14Q8NCE2 650 aa10.8□□□□□ -0.68
TOP3A-208ENST00000542570 OR5B17Q8NGF7 314 aa10.8□□□□□ -0.68
TOP3A-208ENST00000542570 HSD3B7Q9H2F3 369 aa10.8□□□□□ -0.68
TOP3A-208ENST00000542570 NOC2LQ9Y3T9 749 aaKnown RBP10.8□□□□□ -0.68
TOP3A-208ENST00000542570 GOLGA6L7A0A1B0GV03 622 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 HMBSP08397 361 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 TGFB3P10600 412 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 HOXD10P28358 340 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 OR1G1P47890 313 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 FLT3LGP49771 235 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 FCGRTP55899 365 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 SNX16P57768 344 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 NAB2Q15742 525 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 CELF3Q5SZQ8 465 aaKnown RBP10.79□□□□□ -0.68
TOP3A-208ENST00000542570 SPATA20Q8TB22 786 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 RPGRIP1Q96KN7 1286 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 SLITRK6Q9H5Y7 841 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 DHX35Q9H5Z1 703 aaKnown RBP10.79□□□□□ -0.68
TOP3A-208ENST00000542570 TRAF3IP3Q9Y228 551 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 ITGB4P16144 1822 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 I3L4J1 428 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 TTI1O43156 1089 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 MAN1A1P33908 653 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 CCL14Q16627 93 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 SGSM1Q2NKQ1 1148 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 PHLDB3Q6NSJ2 640 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 RGMBQ6NW40 437 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 DNAJC7Q99615 494 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 MKNK1Q9BUB5 465 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 TRIM17Q9Y577 477 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 ZSCAN5CA6NGD5 496 aaPredicted RBP10.79□□□□□ -0.68
TOP3A-208ENST00000542570 SPATA31C2B4DYI2 1134 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 F8VZ95 297 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 SART1O43290 800 aaKnown RBP10.79□□□□□ -0.68
TOP3A-208ENST00000542570 ECEL1O95672 775 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 PDGFRAP16234 1089 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 OAZ1P54368 228 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 CAPSQ13938 189 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 BRI3BPQ8WY22 251 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 C18orf8Q96DM3 657 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 C4BP0C0L5 1744 aa10.79□□□□□ -0.68
TOP3A-208ENST00000542570 UTRNP46939 3433 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 SSU72P8A0A1W2PR75 194 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 C17orf102A2RUQ5 167 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 LRRIQ3A6PVS8 624 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 NDUFAB1O14561 156 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 RGS16O15492 202 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 ADCY3O60266 1144 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 TADA3O75528 432 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 CYP11B1P15538 503 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 RBP5P82980 135 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 R3HDMLQ9H3Y0 253 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 MAP3K20Q9NYL2 800 aaKnown RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 STRNO43815 780 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 PQBP1O60828 265 aaKnown RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 FARP2O94887 1054 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 ARIH2O95376 493 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 KRT10P13645 584 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 SREBF2Q12772 1141 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 ARHGEF6Q15052 776 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 DBR1Q9UK59 544 aaKnown RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 PCDHB2Q9Y5E7 798 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 PPFIA4O75335 1185 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 TUBBP07437 444 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 CDH6P55285 790 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 CUL2Q13617 745 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 RDM1Q8NG50 284 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 THOC1Q96FV9 657 aaKnown RBP10.78□□□□□ -0.68
TOP3A-208ENST00000542570 KCTD10Q9H3F6 313 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 DPP3Q9NY33 737 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 ANAPC5Q9UJX4 755 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 PASKQ96RG2 1323 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 IRS2Q9Y4H2 1338 aa10.78□□□□□ -0.68
TOP3A-208ENST00000542570 RTN2O75298 545 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 SRGAP2BP0DMP2 458 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 CPB1P15086 417 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 KCNA2P16389 499 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 IRX4P78413 519 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 AADACL2Q6P093 401 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 MPZL3Q6UWV2 235 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 MAP7D3Q8IWC1 876 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 CCDC97Q96F63 343 aaPredicted RBP10.77□□□□□ -0.68
TOP3A-208ENST00000542570 CISHQ9NSE2 258 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 ATRNL1Q5VV63 1379 aa10.77□□□□□ -0.68
TOP3A-208ENST00000542570 LRRC10BA6NIK2 292 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 SDC4P31431 198 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 CPT1AP50416 773 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 TUBB4BP68371 445 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 TBX2Q13207 712 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 FSCN1Q16658 493 aaKnown RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 C4orf50Q6ZRC1 276 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 OR2W6PQ8NHA6 318 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 ZC3H15Q8WU90 426 aaKnown RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 LPPQ93052 612 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms