RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 EPM2AIP1Q7L775 607 aaPredicted RBP16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 GJD3Q8N144 294 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 LNX1Q8TBB1 728 aaPredicted RBP16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 HPS3Q969F9 1004 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 RPF1Q9H9Y2 349 aaKnown RBP16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 AGO2Q9UKV8 859 aaKnown RBP16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.82■□□□□ 0.28
ECHDC2-223ENST00000542552 A0A1B0GVL5 298 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 TRAPPC3O43617 180 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 PAPLNO95428 1278 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 CYP3A5P20815 502 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 CASP1P29466 404 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 LRPAP1P30533 357 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 HOXD13P35453 343 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 ACOT2P49753 483 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 ASIC1P78348 528 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 NUCB2P80303 420 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 SPAG1Q07617 926 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 CBX2Q14781 532 aaPredicted RBP16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 CD302Q8IX05 232 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 C12orf76Q8N812 135 aaPredicted RBP16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 POMGNT1Q8WZA1 660 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 KIF12Q96FN5 646 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 CLSTN3Q9BQT9 956 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 APOL5Q9BWW9 433 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 PHF7Q9BWX1 381 aaPredicted RBP16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 TMEM206Q9H813 350 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 USP25Q9UHP3 1055 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 SERTAD1Q9UHV2 236 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 DERAQ9Y315 318 aa16.81■□□□□ 0.28
ECHDC2-223ENST00000542552 PVALEFA0A1B0GWK0 134 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 A0A1W2PQ27 194 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 A0A1W2PQ64 194 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 A0A1W2PQD8 194 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 LOC730098B7Z3J9 87 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 PRPF6O94906 941 aaKnown RBP16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 GLUD1P00367 558 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 RPL17P18621 184 aaKnown RBP16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 GARTP22102 1010 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 BRCC3P46736 316 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 CUL4BQ13620 913 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 PSMD5Q16401 504 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 PDXDC1Q6P996 788 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 CEP57L1Q8IYX8 460 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 TMEM130Q8N3G9 435 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 ZNF507Q8TCN5 953 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 HDAC7Q8WUI4 952 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 KHSRPQ92945 711 aaKnown RBP eCLIP16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 BLZF1Q9H2G9 400 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 ASB7Q9H672 318 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 SFXN1Q9H9B4 322 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 CDH22Q9UJ99 828 aa16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 UBQLN1Q9UMX0 589 aaKnown RBP16.8■□□□□ 0.28
ECHDC2-223ENST00000542552 I3L4J1 428 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 TGM5O43548 720 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 TKTP29401 623 aaKnown RBP16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 AFMP43652 599 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 NDUFA8P51970 172 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 FAM26FQ5R3K3 315 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 SPATA1Q5VX52 437 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 JADE1Q6IE81 842 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 CES5AQ6NT32 575 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 PALB2Q86YC2 1186 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 GRAMD1CQ8IYS0 662 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 SYCP3Q8IZU3 236 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 CMASQ8NFW8 434 aaPredicted RBP16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 FEZF2Q8TBJ5 459 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 PAGE5Q96GU1 130 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 SUSD3Q96L08 255 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 NECTIN4Q96NY8 510 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 MAN1C1Q9NR34 630 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 MTRRQ9UBK8 725 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 DPP7Q9UHL4 492 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 BACE2Q9Y5Z0 518 aa16.79■□□□□ 0.28
ECHDC2-223ENST00000542552 ADAM12O43184 909 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 XPOTO43592 962 aaKnown RBP16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 KLRC4O43908 158 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 MTHFRP42898 656 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 MRPL58Q14197 206 aaKnown RBP16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 GPR149Q86SP6 731 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 ZSWIM2Q8NEG5 633 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 RIPOR3Q96MK2 946 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 RHOBTB2Q9BYZ6 727 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 PLEKHA4Q9H4M7 779 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 C2CD2Q9Y426 696 aa16.78■□□□□ 0.28
ECHDC2-223ENST00000542552 C2orf16Q68DN1 1984 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms