RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 HELQQ8TDG4 1101 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 INTS2Q9H0H0 1204 aaKnown RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 SIX2Q9NPC8 291 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 TMEM161AQ9NX61 479 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 DPP3Q9NY33 737 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 CACNG4Q9UBN1 327 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 AP3M2P53677 418 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 GOLGA8FQ08AF8 430 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 GOLGA8DPQ0D2H9 430 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 TMCO2Q7Z6W1 182 aaPredicted RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 CACTINQ8WUQ7 758 aaKnown RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 PPP1R10Q96QC0 940 aaKnown RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 IL23AQ9NPF7 189 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 PCDHB7Q9Y5E2 793 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 ITGB3P05106 788 aa26.67■■□□□ 1.86
LDLRAD3-203ENST00000528989 KRT19P08727 400 aa26.67■■□□□ 1.86
LDLRAD3-203ENST00000528989 GATMP50440 423 aa26.67■■□□□ 1.86
LDLRAD3-203ENST00000528989 CETN1Q12798 172 aa26.67■■□□□ 1.86
LDLRAD3-203ENST00000528989 NCOA4Q13772 614 aa26.67■■□□□ 1.86
LDLRAD3-203ENST00000528989 UPP2O95045 317 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 PIK3CAP42336 1068 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 FPGSQ05932 587 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 SPOPLQ6IQ16 392 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 RPS6KC1Q96S38 1066 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 DERAQ9Y315 318 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 ITIH6Q6UXX5 1313 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 GYPCP04921 128 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 TRIM21P19474 475 aaKnown RBP26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 MYL6P60660 151 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 NAB2Q15742 525 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 PHLDB3Q6NSJ2 640 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 NT5DC4Q86YG4 428 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 ELAC1Q9H777 363 aaKnown RBP26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 UBN1Q9NPG3 1134 aa26.66■■□□□ 1.86
LDLRAD3-203ENST00000528989 RANBP2P49792 3224 aaKnown RBP26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 ABHD14A-ACY1A0A1B0GW23 586 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 PPEF2O14830 753 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 THP07101 528 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 TBX2Q13207 712 aaPredicted RBP26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 KLHDC7AQ5VTJ3 777 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 ZNF365Q70YC5 407 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 RABGGTAQ92696 567 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 TATDN2Q93075 761 aa26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 AJAP1Q9UKB5 411 aaPredicted RBP26.65■■□□□ 1.86
LDLRAD3-203ENST00000528989 TTC3P53804 2025 aa26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 POLR2BP30876 1174 aaKnown RBP26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 DEFB103AP81534 67 aa26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 GLB1LQ6UWU2 654 aa26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 TTYH3Q9C0H2 523 aa26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 APOBEC3GQ9HC16 384 aaKnown RBP26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 LRFN2Q9ULH4 789 aa26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 UBQLN1Q9UMX0 589 aaKnown RBP26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 AGAP1Q9UPQ3 857 aa26.64■■□□□ 1.86
LDLRAD3-203ENST00000528989 PFKMP08237 780 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 IGFBP6P24592 240 aaPredicted RBP26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 CASP14P31944 242 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 FXR1P51114 621 aaKnown RBP eCLIP26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 PPIGQ13427 754 aaKnown RBP eCLIP26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 TRPC3Q13507 836 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 ARID5BQ14865 1188 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 RRAGAQ7L523 313 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 ARHGEF19Q8IW93 802 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 BEST2Q8NFU1 509 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 NEK11Q8NG66 645 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 GANQ9H2C0 597 aa26.64■■□□□ 1.85
LDLRAD3-203ENST00000528989 UCHL3P15374 230 aa26.63■■□□□ 1.85
LDLRAD3-203ENST00000528989 POLR2FP61218 127 aaKnown RBP26.63■■□□□ 1.85
LDLRAD3-203ENST00000528989 XYLT2Q9H1B5 865 aa26.63■■□□□ 1.85
LDLRAD3-203ENST00000528989 NLRC4Q9NPP4 1024 aa26.63■■□□□ 1.85
LDLRAD3-203ENST00000528989 PLCB1Q9NQ66 1216 aa26.63■■□□□ 1.85
LDLRAD3-203ENST00000528989 FHOD1Q9Y613 1164 aa26.63■■□□□ 1.85
LDLRAD3-203ENST00000528989 ADKP55263 362 aaKnown RBP26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 WDR5P61964 334 aaKnown RBP26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 PAAF1Q9BRP4 392 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 B4GALT3O60512 393 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 FGBP02675 491 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 CCDC173Q0VFZ6 552 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 NOMO2Q5JPE7 1267 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 FAM117BQ6P1L5 589 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 FAM43BQ6ZT52 329 aaPredicted RBP26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 ZNF280BQ86YH2 543 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 KAT5Q92993 513 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 CASD1Q96PB1 797 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 PPP1R9BQ96SB3 815 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 APEX2Q9UBZ4 518 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 ITGA11Q9UKX5 1188 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 NUB1Q9Y5A7 615 aa26.62■■□□□ 1.85
LDLRAD3-203ENST00000528989 MICAL3Q7RTP6 2002 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 CLSTN1O94985 981 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 TMEM240Q5SV17 173 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 C9orf57Q5W0N0 161 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 CCDC186Q7Z3E2 898 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 NPAS4Q8IUM7 802 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 GPIHBP1Q8IV16 184 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 TOP1MTQ969P6 601 aa26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 UBE2TQ9NPD8 197 aaPredicted RBP26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 CXXC1Q9P0U4 656 aaPredicted RBP26.61■■□□□ 1.85
LDLRAD3-203ENST00000528989 RALGAPA2Q2PPJ7 1873 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms