RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 BCL11AQ9H165 835 aa7.87□□□□□ -1.15
VPS26B-204ENST00000527586 RNF39Q9H2S5 420 aa7.87□□□□□ -1.15
VPS26B-204ENST00000527586 SLITRK6Q9H5Y7 841 aa7.87□□□□□ -1.15
VPS26B-204ENST00000527586 JPH1Q9HDC5 661 aaPredicted RBP7.87□□□□□ -1.15
VPS26B-204ENST00000527586 TOMM22Q9NS69 142 aa7.87□□□□□ -1.15
VPS26B-204ENST00000527586 SLC9A2Q9UBY0 812 aa7.87□□□□□ -1.15
VPS26B-204ENST00000527586 PIN4Q9Y237 131 aaKnown RBP7.87□□□□□ -1.15
VPS26B-204ENST00000527586 PCDHB2Q9Y5E7 798 aa7.87□□□□□ -1.15
VPS26B-204ENST00000527586 PCDH15Q96QU1 1955 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 M0R2C6 588 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 MOSPD3O75425 235 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 LRG1P02750 347 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 HNF1BP35680 557 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 GPC3P51654 580 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 ACTR2P61160 394 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 RAB33AQ14088 237 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 PTPAQ15257 358 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 IGFBP7Q16270 282 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 PLEKHG6Q3KR16 790 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 ITPRIPL2Q3MIP1 535 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 CYP4A22Q5TCH4 519 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 NFXL1Q6ZNB6 911 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 ERC1Q8IUD2 1116 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 NLRP7Q8WX94 980 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 APPBP2Q92624 585 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 RABGGTAQ92696 567 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 LRRC3BQ96PB8 259 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 TTPALQ9BTX7 342 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 FBRSL1Q9HCM7 1045 aaKnown RBP7.86□□□□□ -1.15
VPS26B-204ENST00000527586 GPRC5CQ9NQ84 441 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 ADAM28Q9UKQ2 775 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 EXOC6BQ9Y2D4 811 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 NBASA2RRP1 2371 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 CABIN1Q9Y6J0 2220 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 VWA8A3KMH1 1905 aa7.86□□□□□ -1.15
VPS26B-204ENST00000527586 CNTNAP2Q9UHC6 1331 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 TNFSF14O43557 240 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 ORC4O43929 436 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 TADA2AO75478 443 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 ITGB2P05107 769 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 IFIT2P09913 472 aaKnown RBP7.85□□□□□ -1.15
VPS26B-204ENST00000527586 ITGB5P18084 799 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 DRD1P21728 446 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 OR1D2P34982 312 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 GALK1P51570 392 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 DSC1Q08554 894 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 TARDBPQ13148 414 aaKnown RBP eCLIP7.85□□□□□ -1.15
VPS26B-204ENST00000527586 PSMD2Q13200 908 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 TEAD2Q15562 447 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 FBXO43Q4G163 708 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 EFCAB12Q6NXP0 572 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 MRPL10Q7Z7H8 261 aaKnown RBP7.85□□□□□ -1.15
VPS26B-204ENST00000527586 HS6ST3Q8IZP7 471 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 LRRC71Q8N4P6 559 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 HIC2Q96JB3 615 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 TTC14Q96N46 770 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 LRRCC1Q9C099 1032 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 IL21RQ9HBE5 538 aa7.85□□□□□ -1.15
VPS26B-204ENST00000527586 PDCD11Q14690 1871 aaKnown RBP7.85□□□□□ -1.15
VPS26B-204ENST00000527586 ANO9A1A5B4 782 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 PALM3A6NDB9 673 aaPredicted RBP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 TRIM6-TRIM34B2RNG4 842 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 DPYSL4O14531 572 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 BACH1O14867 736 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 KLK10O43240 276 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 AP5Z1O43299 807 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 MYL4P12829 197 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 ATP5JP18859 108 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 U2AF2P26368 475 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 TMOD1P28289 359 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 FOXK1P85037 733 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 CACNB1Q02641 598 aaPredicted RBP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 ZNF33AQ06730 810 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 SPIRE1Q08AE8 756 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 GRIK2Q13002 908 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 MTMR1Q13613 665 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 PTPRNQ16849 979 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 TRMT1LQ7Z2T5 733 aaKnown RBP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 CLASRPQ8N2M8 674 aaKnown RBP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 CHFRQ96EP1 664 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 GCOM2Q9BZD3 368 aaPredicted RBP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 TM7SF3Q9NS93 570 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.84□□□□□ -1.15
VPS26B-204ENST00000527586 CELSR2Q9HCU4 2923 aa7.84□□□□□ -1.15
VPS26B-204ENST00000527586 SF3B1O75533 1304 aaKnown RBP eCLIP7.83□□□□□ -1.166e-8■■■■■ 80.2
VPS26B-204ENST00000527586 A0A1W2PQD8 194 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 ARHGEF37A1IGU5 675 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 FLRT2O43155 660 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 ALDH1A2O94788 518 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 ITGB6P18564 788 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 SFPQP23246 707 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS26B-204ENST00000527586 AFMP43652 599 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 PCBP4P57723 403 aaKnown RBP7.83□□□□□ -1.16
VPS26B-204ENST00000527586 PLCB2Q00722 1185 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 RPL6Q02878 288 aaKnown RBP7.83□□□□□ -1.16
VPS26B-204ENST00000527586 PTH1RQ03431 593 aa7.83□□□□□ -1.16
VPS26B-204ENST00000527586 BYSLQ13895 437 aaKnown RBP7.83□□□□□ -1.16
VPS26B-204ENST00000527586 MAP7D1Q3KQU3 841 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms