RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 AARSP49588 968 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD44-218ENST00000525469 CPT1AP50416 773 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 PSMD7P51665 324 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 CLNS1AP54105 237 aaKnown RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 EVCP57679 992 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 DYNLL1P63167 89 aaKnown RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 PTPN11Q06124 597 aaPredicted RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 SCRN1Q12765 414 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 TFCP2Q12800 502 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 LONRF2Q1L5Z9 754 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 KIAA1755Q5JYT7 1200 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 SH2D4BQ5SQS7 431 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 TTC39AQ5SRH9 613 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 ATL3Q6DD88 541 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 CCDC70Q6NSX1 233 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 NFRKBQ6P4R8 1299 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 GIMAP6Q6P9H5 292 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 ITPRIPQ8IWB1 547 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 MYOCDQ8IZQ8 938 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 CAGE1Q8TC20 777 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 ZFAND2BQ8WV99 257 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 ZBTB9Q96C00 473 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 CCDC34Q96HJ3 373 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 TMX3Q96JJ7 454 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 JAKMIP1Q96N16 626 aaKnown RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 YME1L1Q96TA2 773 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 MTG1Q9BT17 334 aaPredicted RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 MMTAG2Q9BU76 263 aaKnown RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 FUT8Q9BYC5 575 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 TNMDQ9H2S6 317 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 SEMA4AQ9H3S1 761 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 FBXO28Q9NVF7 368 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 ANO10Q9NW15 660 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 VPS18Q9P253 973 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 LCMT1Q9UIC8 334 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 PA2G4Q9UQ80 394 aaKnown RBP5.5□□□□□ -1.53
CD44-218ENST00000525469 FAN1Q9Y2M0 1017 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 TMX2Q9Y320 296 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 MYH4Q9Y623 1939 aa5.5□□□□□ -1.53
CD44-218ENST00000525469 SPTBN2O15020 2390 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 TCHHQ07283 1943 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 KAT6AQ92794 2004 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 ERICH2A1L162 156 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 OPA1O60313 960 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 MARCH6O60337 910 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 KPNA6O60684 536 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 RTN3O95197 1032 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 LMNAP02545 664 aaKnown RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 FERP16591 822 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 SDHBP21912 280 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 GBP2P32456 591 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 ICAM3P32942 547 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 ZNF165P49910 485 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 PLCD1P51178 756 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 IRAK1P51617 712 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 GP2P55259 537 aaKnown RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 NLRP5P59047 1200 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 PURAQ00577 322 aaKnown RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 TAGLNQ01995 201 aaKnown RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 APBA1Q02410 837 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 DLX2Q07687 328 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 HYAL1Q12794 435 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 CBX2Q14781 532 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 SNCBQ16143 134 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 STX1AQ16623 288 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 PTGISQ16647 500 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 PTPN21Q16825 1174 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 FAM83BQ5T0W9 1011 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 TTC22Q5TAA0 569 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 IQCEQ6IPM2 695 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 CRELD2Q6UXH1 353 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 LRRC8DQ7L1W4 858 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 EEPD1Q7L9B9 569 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 ADGRA1Q86SQ6 560 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 PDZD3Q86UT5 571 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 VSIG10LQ86VR7 867 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 SMYD4Q8IYR2 804 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 TEX9Q8N6V9 391 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 MIGA1Q8NAN2 632 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 C3orf58Q8NDZ4 430 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 CHST13Q8NET6 341 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 HDAC7Q8WUI4 952 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 LEO1Q8WVC0 666 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 FANCD2OSQ96PS1 177 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 MPHOSPH6Q99547 160 aaKnown RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 HAUS7Q99871 368 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 SLF1Q9BQI6 1058 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 BPIFA3Q9BQP9 254 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 JPH2Q9BR39 696 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 PHF7Q9BWX1 381 aaPredicted RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 LMAN2LQ9H0V9 348 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 SSU72Q9NP77 194 aaKnown RBP5.49□□□□□ -1.53
CD44-218ENST00000525469 COPRSQ9NQ92 184 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 IRAK4Q9NWZ3 460 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 MCM9Q9NXL9 1143 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 RGL1Q9NZL6 768 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 RAB21Q9UL25 225 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 ZDHHC9Q9Y397 364 aa5.49□□□□□ -1.53
CD44-218ENST00000525469 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms