RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 DEPDC1BQ8WUY9 529 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 B3GALT6Q96L58 329 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 PRIMPOLQ96LW4 560 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 GTPBP2Q9BX10 602 aaKnown RBP4.33□□□□□ -1.72
RNF4-211ENST00000509206 DUSP15Q9H1R2 295 aaPredicted RBP4.33□□□□□ -1.72
RNF4-211ENST00000509206 CHMP4BQ9H444 224 aaKnown RBP4.33□□□□□ -1.72
RNF4-211ENST00000509206 SLITRK6Q9H5Y7 841 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 PSTPIP2Q9H939 334 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 UBN1Q9NPG3 1134 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 TRPV5Q9NQA5 729 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 KCNH7Q9NS40 1196 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 DNMT3BQ9UBC3 853 aaKnown RBP4.33□□□□□ -1.72
RNF4-211ENST00000509206 SEC63Q9UGP8 760 aaKnown RBP4.33□□□□□ -1.72
RNF4-211ENST00000509206 FBXW11Q9UKB1 542 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 SAMM50Q9Y512 469 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 PCDHB2Q9Y5E7 798 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 UBIAD1Q9Y5Z9 338 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 DOCK8Q8NF50 2099 aa4.33□□□□□ -1.72
RNF4-211ENST00000509206 COL4A3Q01955 1670 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SMG1Q96Q15 3661 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 HECTD1Q9ULT8 2610 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 ACACAQ13085 2346 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 NFASCO94856 1347 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 FRMPD4Q14CM0 1322 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 ERICH2A1L162 156 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SOWAHDA6NJG2 315 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SLC38A8A6NNN8 435 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 MEIS3P2A8K0S8 358 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 PATE3B3GLJ2 98 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SPECC1L-ADORA2AF8WAN1 911 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 M0R2N6 131 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 CDX4O14627 284 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 DCLK1O15075 740 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 MEFVO15553 781 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 RRP8O43159 456 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 EXTL3O43909 919 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 ZNF862O60290 1169 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 C1QL1O75973 258 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 WISP1O95388 367 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 PAPLNO95428 1278 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 CFIP05156 583 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 PSAPP07602 524 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 RHOP08100 348 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 HOXA9P31269 272 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SCNN1AP37088 669 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SOX9P48436 509 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SERPINB4P48594 390 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 GPC3P51654 580 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 DGKEP52429 567 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 MLLT6P55198 1093 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 DHX9Q08211 1270 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 CYP4F3Q08477 520 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 NCBP1Q09161 790 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 GRSF1Q12849 480 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNF4-211ENST00000509206 SART3Q15020 963 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 TRIP6Q15654 476 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 PSMD5Q16401 504 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 OCLNQ16625 522 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 FAM78AQ5JUQ0 283 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 IQCEQ6IPM2 695 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 FUT10Q6P4F1 479 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 PDXDC1Q6P996 788 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 PRSS55Q6UWB4 352 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 CCNI2Q6ZMN8 369 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 PDZD4Q76G19 769 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 RAB44Q7Z6P3 723 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 RALGPS2Q86X27 583 aaPredicted RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 MAP4K3Q8IVH8 894 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 GPR65Q8IYL9 337 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 HACE1Q8IYU2 909 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNF4-211ENST00000509206 CNNM3Q8NE01 707 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 SMARCD2Q92925 531 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 E2F7Q96AV8 911 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 MTMR8Q96EF0 704 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 RRP36Q96EU6 259 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 CRELD1Q96HD1 420 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 FAM167AQ96KS9 214 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 CDK15Q96Q40 435 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 CORO1BQ9BR76 489 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 MXRA8Q9BRK3 442 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 KRT23Q9C075 422 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 HELLSQ9NRZ9 838 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 CHST7Q9NS84 486 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 HCFC1R1Q9NWW0 138 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 APOBEC2Q9Y235 224 aaKnown RBP4.32□□□□□ -1.72
RNF4-211ENST00000509206 INVSQ9Y283 1065 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 MYH7P12883 1935 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 GREB1Q4ZG55 1949 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 LOXHD1Q8IVV2 1947 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 LAMA4Q16363 1823 aa4.32□□□□□ -1.72
RNF4-211ENST00000509206 AKAP13Q12802 2813 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 MYH15Q9Y2K3 1946 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 SF3B1O75533 1304 aaKnown RBP eCLIP4.31□□□□□ -1.722e-6■■■■■ 112
RNF4-211ENST00000509206 A0A087WZ62 844 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 CCDC194A0A1B0GVG4 234 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 ENO4A6NNW6 628 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 HEPACAM2A8MVW5 462 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 B4E1Z4 1266 aa4.31□□□□□ -1.72
RNF4-211ENST00000509206 PYCARD-AS1I3L0S3 204 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms