RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 LIG4P49917 911 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 MCL1Q07820 350 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 MCM6Q14566 821 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
MED28-203ENST00000503945 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
MED28-203ENST00000503945 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 AXDND1Q5T1B0 1012 aaPredicted RBP13.05□□□□□ -0.32
MED28-203ENST00000503945 CD300LGQ6UXG3 332 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 ADSSL1Q8N142 457 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 SIX5Q8N196 739 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
MED28-203ENST00000503945 DTWD2Q8NBA8 298 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 ZNF461Q8TAF7 563 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 RAD54LQ92698 747 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 REEP2Q9BRK0 252 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 FBXL21Q9UKT6 434 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 TBX20Q9UMR3 447 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 POLIQ9UNA4 740 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 BACE2Q9Y5Z0 518 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
MED28-203ENST00000503945 ZFP37Q9Y6Q3 630 aaPredicted RBP13.05□□□□□ -0.32
MED28-203ENST00000503945 VPS13AQ96RL7 3174 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 H7C4K7 107 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 I3L4J1 428 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 ABLIM1O14639 778 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 C8AP07357 584 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 LAMP2P13473 410 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 PLCG1P19174 1290 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 FSHRP23945 695 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 TKTP29401 623 aaKnown RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 ELF1P32519 619 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 BRCC3P46736 316 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 GRIN1Q05586 938 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 SOX4Q06945 474 aaPredicted RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 SEZ6Q53EL9 994 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 RRAGBQ5VZM2 374 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 CCDC105Q8IYK2 499 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 TSPAN18Q96SJ8 248 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 RTP3Q9BQQ7 232 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 BLOC1S4Q9NUP1 217 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 MTRRQ9UBK8 725 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
MED28-203ENST00000503945 CLUHO75153 1309 aa13.04□□□□□ -0.32
MED28-203ENST00000503945 KRBA1A5PL33 1030 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 STK25O00506 426 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 HNRNPDLO14979 420 aaKnown RBP13.03□□□□□ -0.32
MED28-203ENST00000503945 SYN3O14994 580 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 ADAM12O43184 909 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 CFHP08603 1231 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 HOXA9P31269 272 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 TXLNAP40222 546 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 ZNF131P52739 623 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 ANGPT1Q15389 498 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 SPECC1Q5M775 1068 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 GRASPQ7Z6J2 395 aaPredicted RBP13.03□□□□□ -0.32
MED28-203ENST00000503945 SLC44A3Q8N4M1 653 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 C3orf58Q8NDZ4 430 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 APPL2Q8NEU8 664 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 LARP4BQ92615 738 aaKnown RBP13.03□□□□□ -0.32
MED28-203ENST00000503945 KCNN1Q92952 543 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 C18orf25Q96B23 403 aaPredicted RBP13.03□□□□□ -0.32
MED28-203ENST00000503945 MYADMQ96S97 322 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 RPF1Q9H9Y2 349 aaKnown RBP13.03□□□□□ -0.32
MED28-203ENST00000503945 WNT16Q9UBV4 365 aa13.03□□□□□ -0.32
MED28-203ENST00000503945 K7ENM7 598 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 CCL16O15467 120 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 XPOTO43592 962 aaKnown RBP13.02□□□□□ -0.33
MED28-203ENST00000503945 CYP3A5P20815 502 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 MCM4P33991 863 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 ARPP19P56211 112 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 GTF2BQ00403 316 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 FOXK2Q01167 660 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 PTPAQ15257 358 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
MED28-203ENST00000503945 SLFN12LQ6IEE8 588 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 RSPO2Q6UXX9 243 aaPredicted RBP13.02□□□□□ -0.33
MED28-203ENST00000503945 SV2BQ7L1I2 683 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 GET4Q7L5D6 327 aaPredicted RBP13.02□□□□□ -0.33
MED28-203ENST00000503945 CD302Q8IX05 232 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 MSTO1Q9BUK6 570 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 PANK2Q9BZ23 570 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
MED28-203ENST00000503945 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
MED28-203ENST00000503945 LACTBL1A8MY62 500 aa13.01□□□□□ -0.33
MED28-203ENST00000503945 K7ELQ4 463 aaPredicted RBP13.01□□□□□ -0.33
MED28-203ENST00000503945 PRRG1O14668 218 aa13.01□□□□□ -0.33
MED28-203ENST00000503945 OGTO15294 1046 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms