RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	B3GAT3	O94766	335 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	BAG4	O95429	457 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	ATF2	P15336	505 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	SATB1	Q01826	763 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	PRPF4B	Q13523	1007 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	GLRA4	Q5JXX5	417 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	LAIR1	Q6GTX8	287 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	RSPRY1	Q96DX4	576 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	ZMAT2	Q96NC0	199 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	LRRC3	Q9BY71	257 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	TRPV4	Q9HBA0	871 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	C2orf42	Q9NWW7	574 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	CEP72	Q9P209	647 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	USP18	Q9UMW8	372 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	MRPS17	Q9Y2R5	130 aa	Known RBP	13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	RALGAPA1	Q6GYQ0	2036 aa		13.96	□□□□□ -0.17
LMNA-218	ENST00000502357	PDCD11	Q14690	1871 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	SMIM28	A0A1B0GU29	152 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	ABLIM1	O14639	778 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	TM4SF5	O14894	197 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	GDF9	O60383	454 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	LRP3	O75074	770 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	PAPSS2	O95340	614 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	VNN2	O95498	520 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	PRKCB	P05771	671 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	RET	P07949	1114 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	TXK	P42681	527 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	EPHA5	P54756	1037 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	CALCRL	Q16602	461 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	LPAL2	Q16609	132 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	ST3GAL2	Q16842	350 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	ANKS3	Q6ZW76	656 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	HS6ST3	Q8IZP7	471 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	CEP120	Q8N960	986 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	MCPH1	Q8NEM0	835 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	SECISBP2L	Q93073	1101 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	IER2	Q9BTL4	223 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	LMAN1L	Q9HAT1	526 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	PTPRH	Q9HD43	1115 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	NDRG2	Q9UN36	371 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	GDA	Q9Y2T3	454 aa		13.95	□□□□□ -0.18
LMNA-218	ENST00000502357	BTBD18	B2RXH4	712 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	MAN2B1	O00754	1011 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	CYP11B2	P19099	503 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	VIPR2	P41587	438 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	NAMPT	P43490	491 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	NRL	P54845	237 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	MLLT6	P55198	1093 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	SRSF5	Q13243	272 aa	Known RBP	13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	ECM1	Q16610	540 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	MAPK6	Q16659	721 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	PPM1J	Q5JR12	505 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	CPLX2	Q6PUV4	134 aa	Known RBP	13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	TAS1R3	Q7RTX0	852 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	NETO1	Q8TDF5	533 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	FAM3C	Q92520	227 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	CORO1B	Q9BR76	489 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	KIFC3	Q9BVG8	833 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	TRMT61B	Q9BVS5	477 aa	Known RBP	13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	C2orf40	Q9H1Z8	148 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	ZFP14	Q9HCL3	533 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	POLD4	Q9HCU8	107 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	TUFT1	Q9NNX1	390 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	SEMA4G	Q9NTN9	838 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	PDRG1	Q9NUG6	133 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	FBXL5	Q9UKA1	691 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	GMEB2	Q9UKD1	530 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	INSL5	Q9Y5Q6	135 aa		13.94	□□□□□ -0.18
LMNA-218	ENST00000502357	MARCH6	O60337	910 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	REC8	O95072	547 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	PSMC3	P17980	439 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	ATP2B1	P20020	1258 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	PTGDR	Q13258	359 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	CSRP2	Q16527	193 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	PADI6	Q6TGC4	694 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	PRR23C	Q6ZRP0	262 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	ZBTB8OS	Q8IWT0	167 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	BEST2	Q8NFU1	509 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	SMARCD2	Q92925	531 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	UROC1	Q96N76	676 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	LRRC3B	Q96PB8	259 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	MKNK1	Q9BUB5	465 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	BRD9	Q9H8M2	597 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	TNFSF13B	Q9Y275	285 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	PIAS3	Q9Y6X2	628 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	GREB1	Q4ZG55	1949 aa		13.93	□□□□□ -0.18
LMNA-218	ENST00000502357	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	NEMF	O60524	1076 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	CDKL5	O76039	1030 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	GJA1	P17302	382 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	CCNE1	P24864	410 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	GDI1	P31150	447 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	KRT2	P35908	639 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	GRM5	P41594	1212 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	CCR3	P51677	355 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	DCAF4L1	Q3SXM0	396 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	TXNDC11	Q6PKC3	985 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	MFSD6L	Q8IWD5	586 aa		13.92	□□□□□ -0.18
LMNA-218	ENST00000502357	TMEM130	Q8N3G9	435 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms