RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 CXCL8P10145 99 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 GAP43P17677 238 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 NMT1P30419 496 aaKnown RBP14.37□□□□□ -0.11
ERCC3-209ENST00000494464 RPL9P32969 192 aaKnown RBP14.37□□□□□ -0.11
ERCC3-209ENST00000494464 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.11
ERCC3-209ENST00000494464 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 SLC39A4Q6P5W5 647 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 LILRA6Q6PI73 481 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 CD300LGQ6UXG3 332 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 DYMQ7RTS9 669 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 DNAJC19Q96DA6 116 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 OLFML3Q9NRN5 406 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 ZDHHC7Q9NXF8 308 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 TFIP11Q9UBB9 837 aaKnown RBP14.37□□□□□ -0.11
ERCC3-209ENST00000494464 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 ANK1P16157 1881 aa14.37□□□□□ -0.11
ERCC3-209ENST00000494464 A0A0B4J269 797 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 FRMD3A2A2Y4 597 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 FAM86C2PA6NEL3 165 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 C2CD4DB7Z1M9 353 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
ERCC3-209ENST00000494464 COL9A1P20849 921 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 PPP2R3AQ06190 1150 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 SEZ6Q53EL9 994 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 CEP57Q86XR8 500 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 TDRD5Q8NAT2 981 aaKnown RBP14.36□□□□□ -0.11
ERCC3-209ENST00000494464 TSPAN18Q96SJ8 248 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 CLSTN3Q9BQT9 956 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 STRA6Q9BX79 667 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 FBXW11Q9UKB1 542 aa14.36□□□□□ -0.11
ERCC3-209ENST00000494464 SYCE3A1L190 88 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 GOLGA6L4A6NEF3 574 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 SYN3O14994 580 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 CUTAO60888 179 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 ADRB2P07550 413 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 CYP3A5P20815 502 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 IGFBP6P24592 240 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-209ENST00000494464 TNFSF9P41273 254 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 ENOX2Q16206 610 aaKnown RBP14.35□□□□□ -0.11
ERCC3-209ENST00000494464 E2F4Q16254 413 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 ANKS3Q6ZW76 656 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 ZNF720Q7Z2F6 126 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 GLYCTKQ8IVS8 523 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 ZDHHC14Q8IZN3 488 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 KREMEN2Q8NCW0 462 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 FEZF2Q8TBJ5 459 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 KCNG4Q8TDN1 519 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 EDAQ92838 391 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 C18orf25Q96B23 403 aaPredicted RBP14.35□□□□□ -0.11
ERCC3-209ENST00000494464 MSTO1Q9BUK6 570 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 TNMDQ9H2S6 317 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 CUEDC2Q9H467 287 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 TUBGCP4Q9UGJ1 667 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 STYXL1Q9Y6J8 313 aa14.35□□□□□ -0.11
ERCC3-209ENST00000494464 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 RFPL2O75678 378 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 SP100P23497 879 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 TKTP29401 623 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 LRPAP1P30533 357 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 BRCC3P46736 316 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ALCAMQ13740 583 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 RAB33AQ14088 237 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ZBTB6Q15916 424 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ZC2HC1CQ53FD0 456 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 SLFN12LQ6IEE8 588 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ZNF707Q96C28 371 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 MRPL44Q9H9J2 332 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 RPF1Q9H9Y2 349 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 CPSF3Q9UKF6 684 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 UBQLN1Q9UMX0 589 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 TRIOO75962 3097 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 CLUHO75153 1309 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 TSC2P49815 1807 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 I3L4J1 428 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ADAM12O43184 909 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ZMYND10O75800 440 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 POU2F2P09086 479 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 HOXA9P31269 272 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ZXDAP98168 799 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 POU5F1Q01860 360 aaKnown RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 AXDND1Q5T1B0 1012 aaPredicted RBP14.34□□□□□ -0.11
ERCC3-209ENST00000494464 LIN9Q5TKA1 542 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 SHC4Q6S5L8 630 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 RTL10Q7L3V2 364 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 OTOP3Q7RTS5 596 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 CD302Q8IX05 232 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 PDILTQ8N807 584 aa14.34□□□□□ -0.11
ERCC3-209ENST00000494464 SMG7Q92540 1137 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms