RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PSRC1Q6PGN9 363 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 RFX6Q8HWS3 928 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 IFNLR1Q8IU57 520 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 C7orf61Q8IZ16 206 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 OXCT2Q9BYC2 517 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 STK33Q9BYT3 514 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 COX16Q9P0S2 106 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PTCH2Q9Y6C5 1203 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PAPPA2Q9BXP8 1791 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 ARVCFO00192 962 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 RIOK3O14730 519 aaKnown RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 FGBP02675 491 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 CYBBP04839 570 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 TRIM49P0CI25 452 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 TRIM49CP0CI26 452 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 GJA9P57773 515 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 C1QTNF8P60827 252 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 STK4Q13043 487 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 MTA1Q13330 715 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 TNFRSF25Q93038 417 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 TXNDC16Q9P2K2 825 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 TACC3Q9Y6A5 838 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 SLC4A7Q9Y6M7 1214 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
NF1-215ENST00000493220 PFDN6O15212 129 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 DRAP1Q14919 205 aaPredicted RBP6.69□□□□□ -1.34
NF1-215ENST00000493220 BRD3Q15059 726 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 DHX40Q8IX18 779 aaKnown RBP6.69□□□□□ -1.34
NF1-215ENST00000493220 NDUFAF2Q8N183 169 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ZNF558Q96NG5 402 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ADAM2Q99965 735 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ADAM22Q9P0K1 906 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 IP6K2Q9UHH9 426 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 DERAQ9Y315 318 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 HYOU1Q9Y4L1 999 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ITIH6Q6UXX5 1313 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 MFAP3LO75121 409 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 MOCS3O95396 460 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 CLTBP09497 229 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 PSMA2P25787 234 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 LBX1P52954 281 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 NOP14P78316 857 aaKnown RBP6.69□□□□□ -1.34
NF1-215ENST00000493220 CDK17Q00537 523 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 LONRF2Q1L5Z9 754 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 RNF219Q5W0B1 726 aaPredicted RBP6.69□□□□□ -1.34
NF1-215ENST00000493220 C1orf186Q6ZWK4 172 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 LRRC43Q8N309 656 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 PDCL2Q8N4E4 241 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 KCTD6Q8NC69 237 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 NPLOC4Q8TAT6 608 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 SEPT5Q99719 369 aaPredicted RBP6.69□□□□□ -1.34
NF1-215ENST00000493220 SNTG2Q9NY99 539 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ZNF536O15090 1300 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 MYH1P12882 1939 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 VAV2P52735 878 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ACLYP53396 1101 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 EPHB3P54753 998 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 NCKAP1LP55160 1127 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 MAMDC4Q6UXC1 1216 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ADGRF2Q8IZF7 708 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 TRAPPC12Q8WVT3 735 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 SPOCK2Q92563 424 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 EEF2KMTQ96G04 330 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 RPGRIP1Q96KN7 1286 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 CAPZA3Q96KX2 299 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 KLK14Q9P0G3 267 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 CYB561D2O14569 222 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 CEP104O60308 925 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 EIF4BP23588 611 aaKnown RBP6.69□□□□□ -1.34
NF1-215ENST00000493220 JAG1P78504 1218 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 GRIN1Q05586 938 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 FMR1Q06787 632 aaKnown RBP eCLIP6.69□□□□□ -1.344e-6■■□□□ 12.4
NF1-215ENST00000493220 CCL14Q16627 93 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 TMEM86AQ8N2M4 240 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 BBOF1Q8ND07 529 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 ASAP3Q8TDY4 903 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 HOMER3Q9NSC5 361 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 PARVAQ9NVD7 372 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 COL20A1Q9P218 1284 aa6.69□□□□□ -1.34
NF1-215ENST00000493220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.69□□□□□ -1.343e-7■□□□□ 10
NF1-215ENST00000493220 LGR5O75473 907 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 KRT1P04264 644 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 LAG3P18627 525 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 XPAP23025 273 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 GLRA2P23416 452 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 GPC5P78333 572 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CACNB2Q08289 660 aaPredicted RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 MGAT5BQ3V5L5 792 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 CTXN3Q4LDR2 81 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 MORN1Q5T089 497 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 LRRC8AQ8IWT6 810 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 ACRBPQ8NEB7 543 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 ENGASEQ8NFI3 743 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 TXNRD2Q9NNW7 524 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 IPO11Q9UI26 975 aaKnown RBP6.68□□□□□ -1.34
NF1-215ENST00000493220 HPCAL4Q9UM19 191 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 A0A1W2PQJ5 194 aa6.68□□□□□ -1.34
NF1-215ENST00000493220 GOLGA8CPA6NN73 597 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms