RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ZSCAN18Q8TBC5 510 aaPredicted RBP10.25□□□□□ -0.77
COL17A1-207ENST00000488320 ETNPPLQ8TBG4 499 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 LXNQ9BS40 222 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 SCNM1Q9BWG6 230 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 SLC26A6Q9BXS9 759 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 SLC8A2Q9UPR5 921 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 ANKRD11Q6UB99 2663 aaPredicted RBP10.25□□□□□ -0.77
COL17A1-207ENST00000488320 ZMYM2Q9UBW7 1377 aa10.25□□□□□ -0.77
COL17A1-207ENST00000488320 SPECC1L-ADORA2AF8WAN1 911 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 DPYSL4O14531 572 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 PTGESO14684 152 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 ZBTB39O15060 712 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 CHADO15335 359 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 CCR2P41597 374 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 RBM25P49756 843 aaKnown RBP10.24□□□□□ -0.77
COL17A1-207ENST00000488320 RCAN1P53805 252 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 ROR1Q01973 937 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 CREB5Q02930 508 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 CAPSQ13938 189 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 CTTNQ14247 550 aaKnown RBP10.24□□□□□ -0.77
COL17A1-207ENST00000488320 EPHA7Q15375 998 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 NCAPH2Q6IBW4 605 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 TCEAL6Q6IPX3 200 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
COL17A1-207ENST00000488320 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 TPH2Q8IWU9 490 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 SYNPOQ8N3V7 929 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 TCEAL3Q969E4 200 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 DYDC2Q96IM9 177 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 CCDC43Q96MW1 224 aaKnown RBP10.24□□□□□ -0.77
COL17A1-207ENST00000488320 GPR88Q9GZN0 384 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 ASAH2Q9NR71 780 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 RGL1Q9NZL6 768 aa10.24□□□□□ -0.77
COL17A1-207ENST00000488320 WRAP73Q9P2S5 460 aaPredicted RBP10.24□□□□□ -0.77
COL17A1-207ENST00000488320 SPEGQ15772 3267 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 MYBPHLA2RUH7 354 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 I3L4J1 428 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 EXTL3O43909 919 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 RECQL4O94761 1208 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 RHOBTB1O94844 696 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ABLIM3O94929 683 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 SEC24AO95486 1093 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 CAVIN2O95810 425 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 CEACAM1P13688 526 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ATF2P15336 505 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 BRCC3P46736 316 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 CLCNKBP51801 687 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 CYP4A11Q02928 519 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 TEAD2Q15562 447 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ELF2Q15723 593 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 TXNDC11Q6PKC3 985 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 HAUS6Q7Z4H7 955 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 RALGPS2Q86X27 583 aaPredicted RBP10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ASAP3Q8TDY4 903 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 GATA6Q92908 595 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ADPGKQ9BRR6 497 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ZSWIM4Q9H7M6 989 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 TRPV4Q9HBA0 871 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 XPNPEP1Q9NQW7 623 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 PRMT7Q9NVM4 692 aaPredicted RBP10.23□□□□□ -0.77
COL17A1-207ENST00000488320 PCDHA4Q9UN74 947 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 GDAQ9Y2T3 454 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 COL4A2P08572 1712 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 CEP295Q9C0D2 2601 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 WDFY3Q8IZQ1 3526 aa10.23□□□□□ -0.77
COL17A1-207ENST00000488320 ATG2BQ96BY7 2078 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 LRRIQ4A6NIV6 560 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 H7C4K7 107 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 TAF4O00268 1085 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ARNTLO00327 626 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 N4BP3O15049 544 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 TBX3O15119 743 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ATG13O75143 517 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 DGAT1O75907 488 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 AKAP3O75969 853 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 GLRA2P23416 452 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 IGFBP6P24592 240 aaPredicted RBP10.22□□□□□ -0.77
COL17A1-207ENST00000488320 CTHP32929 405 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ARL2P36404 184 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 TWF1Q12792 350 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 NAB2Q15742 525 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 UAP1L1Q3KQV9 507 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 PLK5Q496M5 336 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 KIAA1211LQ6NV74 962 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 MOXD1Q6UVY6 613 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 MAEAQ7L5Y9 396 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 NOSTRINQ8IVI9 506 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 ZBTB8OSQ8IWT0 167 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 TCEAL8Q8IYN2 117 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 BLIDQ8IZY5 108 aa10.22□□□□□ -0.77
COL17A1-207ENST00000488320 LEMD2Q8NC56 503 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms