RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-219	ENST00000481613	SPATA31D4	Q6ZUB0	917 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	TAS1R3	Q7RTX0	852 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	GLYCTK	Q8IVS8	523 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	SLC44A3	Q8N4M1	653 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	TMEM161B	Q8NDZ6	487 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	HASPIN	Q8TF76	798 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	ZNF707	Q96C28	371 aa	Predicted RBP	11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	TSPAN18	Q96SJ8	248 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	SEMA4A	Q9H3S1	761 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	MFSD1	Q9H3U5	465 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	PLEKHA5	Q9HAU0	1116 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	CNTN3	Q9P232	1028 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	MTRR	Q9UBK8	725 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	WNT16	Q9UBV4	365 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	BACE2	Q9Y5Z0	518 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	CHD6	Q8TD26	2715 aa		11.44	□□□□□ -0.58
GGA1-219	ENST00000481613	FANCM	Q8IYD8	2048 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	SYN3	O14994	580 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	LRRN2	O75325	713 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	SP9	P0CG40	484 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	MAPT	P10636	758 aa	Known RBP	11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	RPL17	P18621	184 aa	Known RBP	11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	TGM1	P22735	817 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	NCKAP1L	P55160	1127 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	OSTN	P61366	133 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	MCL1	Q07820	350 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	GLRA4	Q5JXX5	417 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	RASSF8	Q8NHQ8	419 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	MYADM	Q96S97	322 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	CACNG4	Q9UBN1	327 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	DOCK8	Q8NF50	2099 aa		11.43	□□□□□ -0.58
GGA1-219	ENST00000481613	C2orf16	Q68DN1	1984 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613		H7C4K7	107 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	PODXL	O00592	558 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	ABLIM1	O14639	778 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	XPOT	O43592	962 aa	Known RBP	11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	C8A	P07357	584 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	DCN	P07585	359 aa	Known RBP	11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	CFH	P08603	1231 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	CLTA	P09496	248 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	LAMP2	P13473	410 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	PAX3	P23760	479 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	OR1D2	P34982	312 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	RAD51AP2	Q09MP3	1159 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	SF3A1	Q15459	793 aa	Known RBP	11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	ARSH	Q5FYA8	562 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	HAUS6	Q7Z4H7	955 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	CEP120	Q8N960	986 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	BICD1	Q96G01	975 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	PLIN2	Q99541	437 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	RPP25	Q9BUL9	199 aa	Known RBP	11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	CXCL16	Q9H2A7	254 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	PARVG	Q9HBI0	331 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	FBXL21	Q9UKT6	434 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	MAFF	Q9ULX9	164 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	NUB1	Q9Y5A7	615 aa		11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	MAP1B	P46821	2468 aa	Known RBP	11.42	□□□□□ -0.58
GGA1-219	ENST00000481613	CHD8	Q9HCK8	2581 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	FAM13A	O94988	1023 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	KRT18	P05783	430 aa	Known RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	CYP3A5	P20815	502 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	FSHR	P23945	695 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ELF1	P32519	619 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	DDIT3	P35638	169 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	MATR3	P43243	847 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	LIG4	P49917	911 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ZNF131	P52739	623 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	SLC8B1	Q6J4K2	584 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	GPBP1	Q86WP2	473 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	CD302	Q8IX05	232 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	MYCT1	Q8N699	235 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	APPL2	Q8NEU8	664 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ZNF461	Q8TAF7	563 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	LARP4B	Q92615	738 aa	Known RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	INTS4	Q96HW7	963 aa	Known RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ZBTB45	Q96K62	511 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ZMAT2	Q96NC0	199 aa	Known RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	CCSER1	Q9C0I3	900 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	GOLGA2P5	Q9HBQ8	144 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	ANKFY1	Q9P2R3	1169 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	CCDC39	Q9UFE4	941 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	CDY1	Q9Y6F8	540 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	DOCK6	Q96HP0	2047 aa		11.41	□□□□□ -0.58
GGA1-219	ENST00000481613	COL4A3	Q01955	1670 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	VPS37C	A5D8V6	355 aa	Predicted RBP	11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	TRAK2	O60296	914 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	TBCA	O75347	108 aa	Known RBP	11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	PIGR	P01833	764 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	MYB	P10242	640 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	SRF	P11831	508 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	HARS	P12081	509 aa	Known RBP	11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	PLCG1	P19174	1290 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	TKT	P29401	623 aa	Known RBP	11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	TXLNA	P40222	546 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	BRCC3	P46736	316 aa		11.4	□□□□□ -0.58
GGA1-219	ENST00000481613	ATXN1	P54253	815 aa	Known RBP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms