RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 CHAMP1Q96JM3 812 aa14.2□□□□□ -0.14
HDAC1-207ENST00000481281 TSPAN18Q96SJ8 248 aa14.2□□□□□ -0.14
HDAC1-207ENST00000481281 MAN1C1Q9NR34 630 aa14.2□□□□□ -0.14
HDAC1-207ENST00000481281 EXOC7Q9UPT5 735 aa14.2□□□□□ -0.14
HDAC1-207ENST00000481281 LACTBL1A8MY62 500 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 PI4K2BG5E9Z4 385 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 TGM5O43548 720 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 TRAPPC3O43617 180 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 CYP3A5P20815 502 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 ADSSP30520 456 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 LRPAP1P30533 357 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 MTHFRP42898 656 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 BRCC3P46736 316 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 POU5F1Q01860 360 aaKnown RBP14.19□□□□□ -0.14
HDAC1-207ENST00000481281 ADALQ6DHV7 355 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 TMC5Q6UXY8 1006 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 C15orf39Q6ZRI6 1047 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 GPR149Q86SP6 731 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 CEP57Q86XR8 500 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 CD302Q8IX05 232 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 CMASQ8NFW8 434 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-207ENST00000481281 FEZF2Q8TBJ5 459 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 HDAC7Q8WUI4 952 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 SPATA32Q96LK8 384 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 RIPOR3Q96MK2 946 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 ACCSQ96QU6 501 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 C7orf25Q9BPX7 421 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 CLSTN3Q9BQT9 956 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 PYM1Q9BRP8 204 aaKnown RBP14.19□□□□□ -0.14
HDAC1-207ENST00000481281 RHOBTB2Q9BYZ6 727 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 POMKQ9H5K3 350 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 EPHX3Q9H6B9 360 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 RPF1Q9H9Y2 349 aaKnown RBP14.19□□□□□ -0.14
HDAC1-207ENST00000481281 DPP7Q9UHL4 492 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 AGO2Q9UKV8 859 aaKnown RBP14.19□□□□□ -0.14
HDAC1-207ENST00000481281 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 UBQLN1Q9UMX0 589 aaKnown RBP14.19□□□□□ -0.14
HDAC1-207ENST00000481281 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
HDAC1-207ENST00000481281 I3L4J1 428 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 WEE2P0C1S8 567 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 CMA1P23946 247 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
HDAC1-207ENST00000481281 ACOT2P49753 483 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 ASIC1P78348 528 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 SPAG1Q07617 926 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 EHHADHQ08426 723 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 POSTNQ15063 836 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 ATAT1Q5SQI0 421 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 ELMSAN1Q6PJG2 1045 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 CRELD2Q6UXH1 353 aaPredicted RBP14.18□□□□□ -0.14
HDAC1-207ENST00000481281 PALB2Q86YC2 1186 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 GLYCTKQ8IVS8 523 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 PLEKHA4Q9H4M7 779 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 MTRRQ9UBK8 725 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 FBXW11Q9UKB1 542 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 BACE2Q9Y5Z0 518 aa14.18□□□□□ -0.14
HDAC1-207ENST00000481281 SYN3O14994 580 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 ADAM12O43184 909 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 XPOTO43592 962 aaKnown RBP14.17□□□□□ -0.14
HDAC1-207ENST00000481281 ACTN4O43707 911 aaKnown RBP14.17□□□□□ -0.14
HDAC1-207ENST00000481281 PFKFB1P16118 471 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 SPATA1Q5VX52 437 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 JADE1Q6IE81 842 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 CYP26C1Q6V0L0 522 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 ANKS3Q6ZW76 656 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 STXBP4Q6ZWJ1 553 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 EPM2AIP1Q7L775 607 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-207ENST00000481281 RNF135Q8IUD6 432 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 TMEM130Q8N3G9 435 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 GLIS3Q8NEA6 775 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 POMGNT1Q8WZA1 660 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 HPS3Q969F9 1004 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 RPGRIP1Q96KN7 1286 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 SUSD3Q96L08 255 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 SCAND2PQ9GZW5 306 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-207ENST00000481281 ASB7Q9H672 318 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 TMEM206Q9H813 350 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 HPSEQ9Y251 543 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 DERAQ9Y315 318 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 NUB1Q9Y5A7 615 aa14.17□□□□□ -0.14
HDAC1-207ENST00000481281 TSC2P49815 1807 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 FAM237AA0A1B0GTK4 181 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 SPDYE4A6NLX3 237 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 EIF3DO15371 548 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC1-207ENST00000481281 DCXO43602 365 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 RFPL2O75678 378 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
HDAC1-207ENST00000481281 NFICP08651 508 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 SLFN14P0C7P3 912 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 ALADP13716 330 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 GARTP22102 1010 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 CASP1P29466 404 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 MCM4P33991 863 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 AARSP49588 968 aaKnown RBP eCLIP14.16□□□□□ -0.14
HDAC1-207ENST00000481281 RAB33AQ14088 237 aa14.16□□□□□ -0.14
HDAC1-207ENST00000481281 FAM26FQ5R3K3 315 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms