RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CC2D2BQ6DHV5 1058 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 CCDC62Q6P9F0 684 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 CPNE8Q86YQ8 564 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 KCNH5Q8NCM2 988 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 C1orf54Q8WWF1 131 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 ARHGEF4Q9NR80 690 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 F8W8V4 182 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 CYP7A1P22680 504 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 PKN2Q16513 984 aaKnown RBP22.49■■□□□ 1.19
SDF4-206ENST00000478938 CYP1B1Q16678 543 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 NADK2Q4G0N4 442 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 DNAJC19Q96DA6 116 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 ADAMTS2O95450 1211 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 VCLP18206 1134 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 CHN2P52757 468 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 ASPHQ12797 758 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 CYP4F22Q6NT55 531 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 AGAP3Q96P47 875 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 MKNK1Q9BUB5 465 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 PRPF4O43172 522 aaKnown RBP eCLIP22.48■■□□□ 1.191e-6■□□□□ 10.2
SDF4-206ENST00000478938 TFAP2AP05549 437 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 NR2F2P24468 414 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 HALP42357 657 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 MAP7D1Q3KQU3 841 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 RNF207Q6ZRF8 634 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 SLC13A5Q86YT5 568 aaPredicted RBP22.48■■□□□ 1.19
SDF4-206ENST00000478938 ZFP28Q8NHY6 868 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 SRPK1Q96SB4 655 aaKnown RBP22.48■■□□□ 1.19
SDF4-206ENST00000478938 TUBB6Q9BUF5 446 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 LRP2BPQ9P2M1 347 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 MTUS1Q9ULD2 1270 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 MTMR7Q9Y216 660 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 KIF13BQ9NQT8 1826 aa22.48■■□□□ 1.19
SDF4-206ENST00000478938 C15orf38-AP3S2A0A0A6YYH1 394 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 H3BRJ5 948 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 SLC35G1Q2M3R5 365 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 LVRNQ6Q4G3 990 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 UGT2A3Q6UWM9 527 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 ARPINQ7Z6K5 226 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 NUP93Q8N1F7 819 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 ARHGAP24Q8N264 748 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 MRRFQ96E11 262 aaKnown RBP22.47■■□□□ 1.19
SDF4-206ENST00000478938 MAML3Q96JK9 1138 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 GRIP2Q9C0E4 1043 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 KCTD10Q9H3F6 313 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 UBAP1Q9NZ09 502 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 BAZ2AQ9UIF9 1905 aaKnown RBP22.47■■□□□ 1.19
SDF4-206ENST00000478938 B2RBV5 119 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 KRT15P19012 456 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 NR1H3Q13133 447 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 NCOA4Q13772 614 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 EPHA7Q15375 998 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 MMEL1Q495T6 779 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 FBXL19Q6PCT2 694 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 SHKBP1Q8TBC3 707 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 SCFD1Q8WVM8 642 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 SKA1Q96BD8 255 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 DNAJC18Q9H819 358 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 KIAA1586Q9HCI6 787 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 TBCCD1Q9NVR7 557 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 ZDHHC7Q9NXF8 308 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 GCNT4Q9P109 453 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 PCDH11YQ9BZA8 1340 aa22.47■■□□□ 1.19
SDF4-206ENST00000478938 LSM1O15116 133 aaKnown RBP22.46■■□□□ 1.19
SDF4-206ENST00000478938 ADCY3O60266 1144 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 GCAP28676 217 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 BTKQ06187 659 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 NET1Q7Z628 596 aaPredicted RBP22.46■■□□□ 1.19
SDF4-206ENST00000478938 DEPTORQ8TB45 409 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 ZNF398Q8TD17 642 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 SNX29Q8TEQ0 813 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 SNF8Q96H20 258 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 CCDC77Q9BR77 488 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 OSBPL8Q9BZF1 889 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 RBM38Q9H0Z9 239 aaKnown RBP22.46■■□□□ 1.19
SDF4-206ENST00000478938 DOCK2Q92608 1830 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 POC1B-GALNT4F8VUJ3 575 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 CAPN15O75808 1086 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 CIB2O75838 187 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 LMNB1P20700 586 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 SMARCA1P28370 1054 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 SLC5A2P31639 672 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 RPL5P46777 297 aaKnown RBP22.46■■□□□ 1.19
SDF4-206ENST00000478938 GEMIN4P57678 1058 aaKnown RBP22.46■■□□□ 1.19
SDF4-206ENST00000478938 ACTR3P61158 418 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 STAT4Q14765 748 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 C1orf146Q5VVC0 180 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 NANOGNBQ7Z5D8 188 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 DAGLBQ8NCG7 672 aa22.46■■□□□ 1.19
SDF4-206ENST00000478938 HEMK1Q9Y5R4 338 aaPredicted RBP22.46■■□□□ 1.19
SDF4-206ENST00000478938 GGPS1O95749 300 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 ITIH2P19823 946 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 COMTP21964 271 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 IVDP26440 423 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 STAT1P42224 750 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 PUM3Q15397 648 aaKnown RBP22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms