RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TCP10Q12799 353 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 IKQ13123 557 aaPredicted RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 GIT2Q14161 759 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 IKBKEQ14164 716 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 DSC3Q14574 896 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 SLC18A3Q16572 532 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NFIL3Q16649 462 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 IFI16Q16666 785 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 GLE1Q53GS7 698 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 PRR16Q569H4 304 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ARSHQ5FYA8 562 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 MUM1L1Q5H9M0 696 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 FAM26DQ5JW98 314 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 EXOSC6Q5RKV6 272 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 CCNI2Q6ZMN8 369 aaPredicted RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 EPM2AIP1Q7L775 607 aaPredicted RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 CATSPER3Q86XQ3 398 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 CREG2Q8IUH2 290 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 SIAH1Q8IUQ4 282 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ZFPM1Q8IX07 1006 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NELFCDQ8IXH7 590 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 COG1Q8WTW3 980 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 EDEM1Q92611 657 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF622Q969S3 477 aaKnown RBP eCLIP5.38□□□□□ -1.551e-9■□□□□ 9.5
SF3B6-202ENST00000478050 FAM129BQ96TA1 746 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 CRACR2AQ9BSW2 395 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NIF3L1Q9GZT8 377 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 GANQ9H2C0 597 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TUFT1Q9NNX1 390 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 NLRC4Q9NPP4 1024 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 PLCB1Q9NQ66 1216 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 AIPL1Q9NZN9 384 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 CWC15Q9P013 229 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 TBC1D7Q9P0N9 293 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 VPS18Q9P253 973 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ARMCX3Q9UH62 379 aaPredicted RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 HERC5Q9UII4 1024 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 ADAM21Q9UKJ8 722 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 HPCAL4Q9UM19 191 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 POLIQ9UNA4 740 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 FAN1Q9Y2M0 1017 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 DAAM1Q9Y4D1 1078 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 BZW2Q9Y6E2 419 aaKnown RBP5.38□□□□□ -1.55
SF3B6-202ENST00000478050 DUSP10Q9Y6W6 482 aa5.38□□□□□ -1.55
SF3B6-202ENST00000478050 COL6A3P12111 3177 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 NPHP3-ACAD11A0A0J9YXS1 232 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 LOC100289279A0A1B0GTE1 492 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 GTPBP10A4D1E9 387 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 LRRIQ3A6PVS8 624 aaPredicted RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 CES2O00748 559 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF185O15231 689 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 EIF3DO15371 548 aaKnown RBP eCLIP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 MSH4O15457 936 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 SORBS3O60504 671 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 TLR2O60603 784 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 RPS6KA5O75582 802 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 GFPT2O94808 682 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 CELF2O95319 508 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 IVLP07476 585 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 EPB41P11171 864 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 CES1P23141 567 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 ACTN2P35609 894 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 PRKCIP41743 596 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 LMAN1P49257 510 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 CACNB3P54284 484 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 EPHB4P54760 987 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 GFPT1Q06210 699 aaPredicted RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 KLHL30Q0D2K2 578 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 PABPC4Q13310 644 aaKnown RBP eCLIP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 RAPGEF1Q13905 1077 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 NAB2Q15742 525 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 KNOP1Q1ED39 458 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF792Q3KQV3 632 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 USH1GQ495M9 461 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 CFAP221Q4G0U5 840 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 KLHDC7AQ5VTJ3 777 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 PDE12Q6L8Q7 609 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 EMBQ6PCB8 327 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 LEKR1Q6ZMV7 388 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 GBP6Q6ZN66 633 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 STXBP4Q6ZWJ1 553 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 ZNF438Q7Z4V0 828 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 VPS36Q86VN1 386 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 SFR1Q86XK3 245 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 FMNL3Q8IVF7 1028 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 SPATA4Q8NEY3 305 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 GOLGA5Q8TBA6 731 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 AFAP1L1Q8TED9 768 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 AENQ8WTP8 325 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 GJA10Q969M2 543 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 LENG9Q96B70 501 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 EIF2AK1Q9BQI3 630 aaKnown RBP5.37□□□□□ -1.55
SF3B6-202ENST00000478050 REEP2Q9BRK0 252 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 SELENOOQ9BVL4 669 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 TLR10Q9BXR5 811 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 FGFBP2Q9BYJ0 223 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 TAOK3Q9H2K8 898 aa5.37□□□□□ -1.55
SF3B6-202ENST00000478050 ZHX3Q9H4I2 956 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms