RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 PDCD11Q14690 1871 aaKnown RBP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 HARSP12081 509 aaKnown RBP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 GJB2P29033 226 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 RAD51AP2Q09MP3 1159 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 NOLC1Q14978 699 aaKnown RBP eCLIP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 PABPC1LQ4VXU2 614 aaKnown RBP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 VARS2Q5ST30 1063 aaKnown RBP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 PARM1Q6UWI2 310 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 ZPBP2Q6X784 338 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 ITFG1Q8TB96 612 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 ZBTB45Q96K62 511 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 ANKFY1Q9P2R3 1169 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 DNMT3BQ9UBC3 853 aaKnown RBP19.12■□□□□ 0.65
COL7A1-208ENST00000470076 NUB1Q9Y5A7 615 aa19.12■□□□□ 0.65
COL7A1-208ENST00000470076 PRR23AA6NEV1 266 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 H0YCG3 227 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 H7C4K7 107 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 SLC26A4O43511 780 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 PLA2G4BP0C869 781 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 MAPTP10636 758 aaKnown RBP19.11■□□□□ 0.65
COL7A1-208ENST00000470076 MCM2P49736 904 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 ROR1Q01973 937 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 ASCL5Q7RTU5 278 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 FRMD5Q7Z6J6 570 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 ST13P5Q8NFI4 369 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-208ENST00000470076 NKD2Q969F2 451 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-208ENST00000470076 SHDQ96IW2 340 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 AK8Q96MA6 479 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 PLIN2Q99541 437 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 RPP25Q9BUL9 199 aaKnown RBP19.11■□□□□ 0.65
COL7A1-208ENST00000470076 UPF2Q9HAU5 1272 aaKnown RBP19.11■□□□□ 0.65
COL7A1-208ENST00000470076 HCFC1R1Q9NWW0 138 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 LARSQ9P2J5 1176 aaKnown RBP19.11■□□□□ 0.65
COL7A1-208ENST00000470076 SPTBN4Q9H254 2564 aa19.11■□□□□ 0.65
COL7A1-208ENST00000470076 ARHGEF37A1IGU5 675 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 CLDN3O15551 220 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 ABLIM3O94929 683 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 ELF1P32519 619 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 GPC5P78333 572 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 MCL1Q07820 350 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 SLC10A6Q3KNW5 377 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 TMEM119Q4V9L6 283 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 NPAS3Q8IXF0 933 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 C18orf25Q96B23 403 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-208ENST00000470076 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 AVENQ9NQS1 362 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-208ENST00000470076 MRPS23Q9Y3D9 190 aaKnown RBP19.1■□□□□ 0.65
COL7A1-208ENST00000470076 SIT1Q9Y3P8 196 aa19.1■□□□□ 0.65
COL7A1-208ENST00000470076 WDR27A2RRH5 827 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 PRRG1O14668 218 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 MEFVO15553 781 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-208ENST00000470076 TBC1D4O60343 1298 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 LRG1P02750 347 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 ATF2P15336 505 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 STARD6P59095 220 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 MRPL58Q14197 206 aaKnown RBP19.09■□□□□ 0.65
COL7A1-208ENST00000470076 KCNN1Q92952 543 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 PLEKHA5Q9HAU0 1116 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 ODF2LQ9ULJ1 636 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 SMC3Q9UQE7 1217 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-208ENST00000470076 GVINP1Q7Z2Y8 2422 aa19.09■□□□□ 0.65
COL7A1-208ENST00000470076 CD2BP2O95400 341 aaKnown RBP19.08■□□□□ 0.64
COL7A1-208ENST00000470076 RHOP08100 348 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 CLTAP09496 248 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 PTPN2P17706 415 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 SCP2P22307 547 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 MCM4P33991 863 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 MATR3P43243 847 aaKnown RBP eCLIP19.08■□□□□ 0.64
COL7A1-208ENST00000470076 NCKAP1LP55160 1127 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 PFKPQ01813 784 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 SEZ6Q53EL9 994 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 ARSHQ5FYA8 562 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 TPGS2Q68CL5 300 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 TCEAL8Q8IYN2 117 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 APPL2Q8NEU8 664 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 CALML4Q96GE6 196 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 GDE1Q9NZC3 331 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 FBXL5Q9UKA1 691 aa19.08■□□□□ 0.64
COL7A1-208ENST00000470076 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.08■□□□□ 0.64
COL7A1-208ENST00000470076 BMP15O95972 392 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 UBA7P41226 1012 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 ARPP19P56211 112 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 PRKCQQ04759 706 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 KYAT1Q16773 422 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 CTXN3Q4LDR2 81 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 SPECC1Q5M775 1068 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 ZNF280DQ6N043 979 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 HAUS6Q7Z4H7 955 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 PJA1Q8NG27 643 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 ING5Q8WYH8 240 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 BICD1Q96G01 975 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 TBC1D32Q96NH3 1257 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 KXD1Q9BQD3 176 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 CYP4F11Q9HBI6 524 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 DLGAP2Q9P1A6 1054 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 MAFFQ9ULX9 164 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 MIA3Q5JRA6 1907 aa19.07■□□□□ 0.64
COL7A1-208ENST00000470076 ZNF292O60281 2723 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms