RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 KLC4Q9NSK0 619 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 KDM1AO60341 852 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 PDHA1P08559 390 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 RAB27AP51159 221 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 SLC44A4Q53GD3 710 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 MOXD1Q6UVY6 613 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 TAB3Q8N5C8 712 aaPredicted RBP11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 TMEM143Q96AN5 459 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 OSBPL1AQ9BXW6 950 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 SNX9Q9Y5X1 595 aa11.32□□□□□ -0.6
AMBRA1-202ENST00000458649 TGFB3P10600 412 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 AGBL1Q96MI9 1066 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SLC7A5P2Q9GIP4 190 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SLC4A7Q9Y6M7 1214 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 TADA3O75528 432 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 MOCS2O96007 188 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 CCDC159P0C7I6 412 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 HERVK_113P62684 666 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 STK4Q13043 487 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 FAM102AQ5T9C2 384 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 FRA10AC1Q70Z53 315 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 ANLNQ9NQW6 1124 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 PTPN22Q9Y2R2 807 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 C3P01024 1663 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 KRT75O95678 551 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 IFNA8P32881 189 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 NBPF12Q5TAG4 269 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 CAPN12Q6ZSI9 719 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 EFHD1Q9BUP0 239 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SPATC1LQ9H0A9 340 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 IPPQ9Y573 584 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 CCDC188H7C350 402 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 TAF6P49848 677 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 PPIL2Q13356 520 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SNX1Q13596 522 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 ANO4Q32M45 955 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 CDCA5Q96FF9 252 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SYNPO2Q9UMS6 1093 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 MYMKA6NI61 221 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 SEPT5Q99719 369 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 C11orf70Q9BRQ4 267 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 KCNH7Q9NS40 1196 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 DSEQ9UL01 958 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 PACSIN2Q9UNF0 486 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
AMBRA1-202ENST00000458649 PSMD3O43242 534 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.62e-9■■■■■ 37.9
AMBRA1-202ENST00000458649 NR1I3Q14994 352 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 HEATR6Q6AI08 1181 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 ABHD16BQ9H3Z7 469 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 VCAM1P19320 739 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 ST3GAL1Q11201 340 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 TMTC4Q5T4D3 741 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 ARMCX6Q7L4S7 300 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 GLIS2Q9BZE0 524 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 EIF3DO15371 548 aaKnown RBP eCLIP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 GYS2P54840 703 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 ACTR2P61160 394 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 CCZ1BP86790 482 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 MMEL1Q495T6 779 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 TAF2Q6P1X5 1199 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 DEPDC1BQ8WUY9 529 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 FAF2Q96CS3 445 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 POLR3CQ9BUI4 534 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 HSPBP1Q9NZL4 362 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 PODXLO00592 558 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 TRIM66O15016 1216 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 TTC4O95801 387 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 TOB1P50616 345 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 NLRP11P59045 1033 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
AMBRA1-202ENST00000458649 MRPL9Q9BYD2 267 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms