RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ZBTB41Q5SVQ8 909 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 PRSS55Q6UWB4 352 aaPredicted RBP20.27■□□□□ 0.84
CCDC188-202ENST00000444532 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 SYCP3Q8IZU3 236 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 C3orf58Q8NDZ4 430 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 LNX1Q8TBB1 728 aaPredicted RBP20.27■□□□□ 0.84
CCDC188-202ENST00000444532 POMGNT1Q8WZA1 660 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 KIF12Q96FN5 646 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 RIPOR3Q96MK2 946 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 NECTIN4Q96NY8 510 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 TMEM206Q9H813 350 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 SFXN1Q9H9B4 322 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 UBQLN1Q9UMX0 589 aaKnown RBP20.27■□□□□ 0.84
CCDC188-202ENST00000444532 VWA8A3KMH1 1905 aa20.27■□□□□ 0.84
CCDC188-202ENST00000444532 MTCL1Q9Y4B5 1905 aaKnown RBP20.27■□□□□ 0.84
CCDC188-202ENST00000444532 TISP43B9A030 160 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 SLFN14P0C7P3 912 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 IGFBP6P24592 240 aaPredicted RBP20.26■□□□□ 0.83
CCDC188-202ENST00000444532 ADSSP30520 456 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 MTHFRP42898 656 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 ACOT2P49753 483 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 NUCB2P80303 420 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 PSMD5Q16401 504 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 RARS2Q5T160 578 aaKnown RBP20.26■□□□□ 0.83
CCDC188-202ENST00000444532 C12orf76Q8N812 135 aaPredicted RBP20.26■□□□□ 0.83
CCDC188-202ENST00000444532 PLEKHA4Q9H4M7 779 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 USP25Q9UHP3 1055 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 C5orf42Q9H799 3197 aa20.26■□□□□ 0.83
CCDC188-202ENST00000444532 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 RPL17P18621 184 aaKnown RBP20.25■□□□□ 0.83
CCDC188-202ENST00000444532 GARTP22102 1010 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 LRPAP1P30533 357 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 BRCC3P46736 316 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 SPAG1Q07617 926 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 ATAT1Q5SQI0 421 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 LILRA6Q6PI73 481 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 UNC13DQ70J99 1090 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 PALB2Q86YC2 1186 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 FAM212AQ96EL1 285 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 CHAMP1Q96JM3 812 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 CLSTN3Q9BQT9 956 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 FGFBP2Q9BYJ0 223 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 IKZF4Q9H2S9 585 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 ASB7Q9H672 318 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 MAN1C1Q9NR34 630 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 TUBGCP4Q9UGJ1 667 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 SERTAD1Q9UHV2 236 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 DERAQ9Y315 318 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 NUB1Q9Y5A7 615 aa20.25■□□□□ 0.83
CCDC188-202ENST00000444532 A0A1B0GVL5 298 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 PVALEFA0A1B0GWK0 134 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 LOC730098B7Z3J9 87 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 EIF3DO15371 548 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCDC188-202ENST00000444532 TGM5O43548 720 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 PRPF6O94906 941 aaKnown RBP20.24■□□□□ 0.83
CCDC188-202ENST00000444532 LDHAP00338 332 aaKnown RBP20.24■□□□□ 0.83
CCDC188-202ENST00000444532 PFKFB1P16118 471 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 AFMP43652 599 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 CYP26C1Q6V0L0 522 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 GPR149Q86SP6 731 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 CMASQ8NFW8 434 aaPredicted RBP20.24■□□□□ 0.83
CCDC188-202ENST00000444532 HPSEQ9Y251 543 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 ANK1P16157 1881 aa20.24■□□□□ 0.83
CCDC188-202ENST00000444532 FAM237AA0A1B0GTK4 181 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 SYN3O14994 580 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 ACTN4O43707 911 aaKnown RBP20.23■□□□□ 0.83
CCDC188-202ENST00000444532 IL18RAPO95256 599 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 TKTP29401 623 aaKnown RBP20.23■□□□□ 0.83
CCDC188-202ENST00000444532 EHHADHQ08426 723 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 FAM26FQ5R3K3 315 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 SPATA1Q5VX52 437 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 JADE1Q6IE81 842 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 KANK3Q6NY19 840 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 CRELD2Q6UXH1 353 aaPredicted RBP20.23■□□□□ 0.83
CCDC188-202ENST00000444532 TMC5Q6UXY8 1006 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 C15orf39Q6ZRI6 1047 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 GLYCTKQ8IVS8 523 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 BEST2Q8NFU1 509 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 HPS3Q969F9 1004 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 SUSD3Q96L08 255 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 BLZF1Q9H2G9 400 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
CCDC188-202ENST00000444532 MUC3AQ02505 3323 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 A0A1W2PQ27 194 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 A0A1W2PQ64 194 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 A0A1W2PQD8 194 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 PI4K2BG5E9Z4 385 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 I3L4J1 428 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 KIAA0391O15091 583 aaKnown RBP20.22■□□□□ 0.83
CCDC188-202ENST00000444532 MCM4P33991 863 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 CUL4BQ13620 913 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 TMEM132DQ14C87 1099 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 EPM2AIP1Q7L775 607 aaPredicted RBP20.22■□□□□ 0.83
CCDC188-202ENST00000444532 KREMEN2Q8NCW0 462 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 ZNF507Q8TCN5 953 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 KHSRPQ92945 711 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC188-202ENST00000444532 PAGE5Q96GU1 130 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms