RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SRFP11831 508 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 LAMP2P13473 410 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 KCNE1P15382 129 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 FGFR3P22607 806 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PRR20EP86478 221 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PRR20CP86479 221 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PRR20DP86480 221 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PRR20BP86481 221 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PRR20AP86496 221 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 NBR1Q14596 966 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 ZRSR1Q15695 479 aaKnown RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 XKR4Q5GH76 650 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 CD302Q8IX05 232 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 LNX1Q8TBB1 728 aaPredicted RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 TMX3Q96JJ7 454 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 ARHGAP28Q9P2N2 729 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 MTRRQ9UBK8 725 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 CCDC39Q9UFE4 941 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 FBXW11Q9UKB1 542 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 SMIM28A0A1B0GU29 152 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 E9PMD0 336 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 NCAM2O15394 837 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 LRG1P02750 347 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 KRT18P05783 430 aaKnown RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 ASGR2P07307 311 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 C8AP07357 584 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 CLTAP09496 248 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PLA2G4BP0C869 781 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 PTPN2P17706 415 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 GJB2P29033 226 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 LONP1P36776 959 aaKnown RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 TXLNAP40222 546 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 MAGEA9P43362 315 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 AXDND1Q5T1B0 1012 aaPredicted RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 TPGS2Q68CL5 300 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PHLDB3Q6NSJ2 640 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 KANK3Q6NY19 840 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 LEMD2Q8NC56 503 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PRSS33Q8NF86 280 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 FLCNQ8NFG4 579 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 BSNDQ8WZ55 320 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 KCNN1Q92952 543 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 BICD1Q96G01 975 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 PPP1R10Q96QC0 940 aaKnown RBP8.5□□□□□ -1.05
CD44-211ENST00000442151 NELL2Q99435 816 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 CLSTN3Q9BQT9 956 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 CDH7Q9ULB5 785 aa8.5□□□□□ -1.05
CD44-211ENST00000442151 VWA3AA6NCI4 1184 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 PTGESO14684 152 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 MICAL2O94851 1124 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 FAM13AO94988 1023 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 KIF4AO95239 1232 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 SPATA31D3P0C874 917 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 AOC1P19801 751 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 CYP3A5P20815 502 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 OR1D2P34982 312 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 POU5F1Q01860 360 aaKnown RBP8.49□□□□□ -1.05
CD44-211ENST00000442151 PLD1Q13393 1074 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 UPP1Q16831 310 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 C8orf34Q49A92 452 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 SLFN12LQ6IEE8 588 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 IQCEQ6IPM2 695 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 ALKAL1Q6UXT8 129 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 SPATA31D4Q6ZUB0 917 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 SLC44A3Q8N4M1 653 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 ZNF461Q8TAF7 563 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 TARS2Q9BW92 718 aaKnown RBP8.49□□□□□ -1.05
CD44-211ENST00000442151 CDT1Q9H211 546 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
CD44-211ENST00000442151 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
CD44-211ENST00000442151 PROB1E7EW31 1015 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 PODXLO00592 558 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 PRRG1O14668 218 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 SLC16A4O15374 487 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 RFPL2O75678 378 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 LIG4P49917 911 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 CLCNKBP51801 687 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 VCPP55072 806 aaKnown RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 PRKCQQ04759 706 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 PPP2R3AQ06190 1150 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 NOLC1Q14978 699 aaKnown RBP eCLIP8.48□□□□□ -1.05
CD44-211ENST00000442151 POSTNQ15063 836 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 ECM1Q16610 540 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 RTP2Q5QGT7 225 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 PRSS55Q6UWB4 352 aaPredicted RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 USP37Q86T82 979 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 GLYCTKQ8IVS8 523 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 ZNF707Q96C28 371 aaPredicted RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 ZNF512Q96ME7 567 aaPredicted RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 KIF2CQ99661 725 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 GPR88Q9GZN0 384 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms