RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 PPP1R10Q96QC0 940 aaKnown RBP28.54■■■□□ 2.16
TMEM248-205ENST00000433271 RPS6KC1Q96S38 1066 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 EDEM3Q9BZQ6 932 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 ITGA11Q9UKX5 1188 aa28.54■■■□□ 2.16
TMEM248-205ENST00000433271 INPPL1O15357 1258 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 EVI5O60447 810 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 ZC3H11AO75152 810 aaKnown RBP eCLIP28.53■■■□□ 2.16
TMEM248-205ENST00000433271 CYP3A5P20815 502 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 APBA1Q02410 837 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 CXorf38Q8TB03 319 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 GANQ9H2C0 597 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 RNF19AQ9NV58 838 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 SLC38A7Q9NVC3 462 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 APEX2Q9UBZ4 518 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 SIX4Q9UIU6 781 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 FBXL5Q9UKA1 691 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 CAPN11Q9UMQ6 739 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 PCDHB7Q9Y5E2 793 aa28.53■■■□□ 2.16
TMEM248-205ENST00000433271 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.53■■■□□ 2.16
TMEM248-205ENST00000433271 ABHD14A-ACY1A0A1B0GW23 586 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 A0A1W2PQJ5 194 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 UCHL3P15374 230 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 CPLX3Q8WVH0 158 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 C18orf25Q96B23 403 aaPredicted RBP28.52■■■□□ 2.16
TMEM248-205ENST00000433271 IL23AQ9NPF7 189 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 CEP72Q9P209 647 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 DAAM1Q9Y4D1 1078 aa28.52■■■□□ 2.16
TMEM248-205ENST00000433271 OFD1O75665 1012 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 THP07101 528 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 CASP14P31944 242 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 AFF1P51825 1210 aaKnown RBP28.51■■■□□ 2.15
TMEM248-205ENST00000433271 GSDMDP57764 484 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 SGSM1Q2NKQ1 1148 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 WDR44Q5JSH3 913 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 GLB1LQ6UWU2 654 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 CRIPAKQ8N1N5 446 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 TUBGCP4Q9UGJ1 667 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 PLAGL2Q9UPG8 496 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 PDCD11Q14690 1871 aaKnown RBP28.51■■■□□ 2.15
TMEM248-205ENST00000433271 ITGB3P05106 788 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 FXR1P51114 621 aaKnown RBP eCLIP28.51■■■□□ 2.15
TMEM248-205ENST00000433271 GUCY2FP51841 1108 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 POLR2FP61218 127 aaKnown RBP28.51■■■□□ 2.15
TMEM248-205ENST00000433271 RBP5P82980 135 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 PPIGQ13427 754 aaKnown RBP eCLIP28.51■■■□□ 2.15
TMEM248-205ENST00000433271 SCARA3Q6AZY7 606 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 PHLDB3Q6NSJ2 640 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 CCDC186Q7Z3E2 898 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 CCDC150Q8NCX0 1101 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 BADQ92934 168 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 NT5C1BQ96P26 610 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 PI4K2AQ9BTU6 479 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 IMPG2Q9BZV3 1241 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 MIOSQ9NXC5 875 aa28.51■■■□□ 2.15
TMEM248-205ENST00000433271 LUC7L2Q9Y383 392 aaKnown RBP28.51■■■□□ 2.15
TMEM248-205ENST00000433271 TTC3P53804 2025 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 RNF225M0QZC1 329 aaPredicted RBP28.5■■■□□ 2.15
TMEM248-205ENST00000433271 EFCAB14O75071 495 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 ASS1P00966 412 aaKnown RBP28.5■■■□□ 2.15
TMEM248-205ENST00000433271 PTMAP06454 111 aaKnown RBP28.5■■■□□ 2.15
TMEM248-205ENST00000433271 KRT19P08727 400 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 RFX1P22670 979 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 SCNN1GP51170 649 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 MYL6P60660 151 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 LRMPQ12912 555 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 LRFN2Q9ULH4 789 aa28.5■■■□□ 2.15
TMEM248-205ENST00000433271 R3HCC1Q9Y3T6 440 aaKnown RBP28.5■■■□□ 2.15
TMEM248-205ENST00000433271 AKR1B15C9JRZ8 316 aaPredicted RBP28.49■■■□□ 2.15
TMEM248-205ENST00000433271 DEKP35659 375 aaKnown RBP28.49■■■□□ 2.15
TMEM248-205ENST00000433271 CLLU1OSQ5K130 101 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 CACNA2D4Q7Z3S7 1137 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 NPAS4Q8IUM7 802 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 CNGA4Q8IV77 575 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 ZNF397Q8NF99 534 aaPredicted RBP28.49■■■□□ 2.15
TMEM248-205ENST00000433271 TAF4BQ92750 862 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 NAA15Q9BXJ9 866 aaKnown RBP28.49■■■□□ 2.15
TMEM248-205ENST00000433271 AGAP1Q9UPQ3 857 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 MICAL3Q7RTP6 2002 aa28.49■■■□□ 2.15
TMEM248-205ENST00000433271 ACRP10323 421 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 FGFR1P11362 822 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 POLR2BP30876 1174 aaKnown RBP28.48■■■□□ 2.15
TMEM248-205ENST00000433271 ATICP31939 592 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 ZBED6P86452 979 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 FPGSQ05932 587 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 NAB2Q15742 525 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 HELQQ8TDG4 1101 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 XYLT2Q9H1B5 865 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 UBE2TQ9NPD8 197 aaPredicted RBP28.48■■■□□ 2.15
TMEM248-205ENST00000433271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.48■■■□□ 2.153e-6■■■■□ 26.7
TMEM248-205ENST00000433271 INPP5FQ9Y2H2 1132 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 FHOD1Q9Y613 1164 aa28.48■■■□□ 2.15
TMEM248-205ENST00000433271 HOXA2O43364 376 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 MFAP3LO75121 409 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 BAIAP3O94812 1187 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 ADKP55263 362 aaKnown RBP28.47■■■□□ 2.15
TMEM248-205ENST00000433271 NOP14P78316 857 aaKnown RBP28.47■■■□□ 2.15
TMEM248-205ENST00000433271 SOX4Q06945 474 aaPredicted RBP28.47■■■□□ 2.15
TMEM248-205ENST00000433271 GRIK3Q13003 919 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 IQCEQ6IPM2 695 aa28.47■■■□□ 2.15
TMEM248-205ENST00000433271 GJB7Q6PEY0 223 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms