RNA–Protein interactions for RNA: ENST00000423956.5

RAD50-203, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 2,915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-203ENST00000423956 DNMT3BQ9UBC3 853 aaKnown RBP4.47□□□□□ -1.69
RAD50-203ENST00000423956 SAMM50Q9Y512 469 aa4.47□□□□□ -1.69
RAD50-203ENST00000423956 COL4A3Q01955 1670 aa4.47□□□□□ -1.69
RAD50-203ENST00000423956 B4GALT3O60512 393 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 TSPAN1O60635 241 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 CAPNS1P04632 268 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 HMGB1P09429 215 aaKnown RBP4.46□□□□□ -1.69
RAD50-203ENST00000423956 RPL17P18621 184 aaKnown RBP4.46□□□□□ -1.69
RAD50-203ENST00000423956 ELF1P32519 619 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 NUCB1Q02818 461 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 SLC14A1Q13336 389 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 CCINQ13939 588 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 RTN1Q16799 776 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 TUSC1Q2TAM9 212 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 DCAF4L1Q3SXM0 396 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 LRCH2Q5VUJ6 765 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 PDZD4Q76G19 769 aaPredicted RBP4.46□□□□□ -1.69
RAD50-203ENST00000423956 FERMT3Q86UX7 667 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 CHD1LQ86WJ1 897 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 PROSER1Q86XN7 944 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 RHPN2Q8IUC4 686 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 YAF2Q8IY57 180 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 DAGLBQ8NCG7 672 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 CEP76Q8TAP6 659 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 ITFG1Q8TB96 612 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 SLC7A14Q8TBB6 771 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 KXD1Q9BQD3 176 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 RPP25Q9BUL9 199 aaKnown RBP4.46□□□□□ -1.69
RAD50-203ENST00000423956 GPR62Q9BZJ7 368 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 HEBP1Q9NRV9 189 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 ANKEF1Q9NU02 776 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 SLC38A7Q9NVC3 462 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 PRG3Q9Y2Y8 225 aaPredicted RBP4.46□□□□□ -1.69
RAD50-203ENST00000423956 TICRRQ7Z2Z1 1910 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 EPG5Q9HCE0 2579 aa4.46□□□□□ -1.69
RAD50-203ENST00000423956 EP300Q09472 2414 aaPredicted RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 KIAA1549LQ6ZVL6 1849 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 ADAMTS20P59510 1910 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 A0A1B0GUA9 196 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 C1QTNF9BB2RNN3 333 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 C2CD2LO14523 706 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 TRDMT1O14717 391 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 KHNYNO15037 678 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 PRPF3O43395 683 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 SSBP05455 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
RAD50-203ENST00000423956 P4HBP07237 508 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 C1QTNF9P0C862 333 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 ATF2P15336 505 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 PFKLP17858 780 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 DRD1P21728 446 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 IBSPP21815 317 aaPredicted RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 QARSP47897 775 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 RING1Q06587 406 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 SMARCB1Q12824 385 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 TSGA10IPQ3SY00 556 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 PSAPL1Q6NUJ1 521 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 TAS1R1Q7RTX1 841 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 PIP4P1Q86T03 277 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 PDZD3Q86UT5 571 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 PALB2Q86YC2 1186 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 BEST2Q8NFU1 509 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 THAP11Q96EK4 314 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 TRIM6Q9C030 488 aaPredicted RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 ARRDC1-AS1Q9H2J1 176 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 THG1LQ9NWX6 298 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 AFF4Q9UHB7 1163 aaKnown RBP4.46□□□□□ -1.7
RAD50-203ENST00000423956 SLC8A2Q9UPR5 921 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 BAHCC1Q9P281 2608 aa4.46□□□□□ -1.7
RAD50-203ENST00000423956 SPECC1L-ADORA2AF8WAN1 911 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 MSH4O15457 936 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 SGSM2O43147 1006 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 APBB3O95704 486 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 POMCP01189 267 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 THP07101 528 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 TCF3P15923 654 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 CTHP32929 405 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 RPL9P32969 192 aaKnown RBP4.45□□□□□ -1.7
RAD50-203ENST00000423956 MLH1P40692 756 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 LAMTOR4Q0VGL1 99 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 KRT32Q14532 448 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 ZNF268Q14587 947 aaPredicted RBP4.45□□□□□ -1.7
RAD50-203ENST00000423956 PLK5Q496M5 336 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 MTERF2Q49AM1 385 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 RTP2Q5QGT7 225 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 RNF20Q5VTR2 975 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 TANGO2Q6ICL3 276 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 PPP4R3AQ6IN85 833 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 VITQ6UXI7 678 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 SYT13Q7L8C5 426 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 SCUBE3Q8IX30 993 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 GAD1Q99259 594 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 RNF26Q9BY78 433 aaPredicted RBP4.45□□□□□ -1.7
RAD50-203ENST00000423956 GPSM3Q9Y4H4 160 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 MAP1BP46821 2468 aaKnown RBP4.45□□□□□ -1.7
RAD50-203ENST00000423956 USP24Q9UPU5 2620 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 BAZ2BQ9UIF8 2168 aaKnown RBP4.45□□□□□ -1.7
RAD50-203ENST00000423956 DDX39AO00148 427 aaKnown RBP4.45□□□□□ -1.7
RAD50-203ENST00000423956 TNFRSF10BO14763 440 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 AXIN1O15169 862 aa4.45□□□□□ -1.7
RAD50-203ENST00000423956 CCL16O15467 120 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms