RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SUSD6Q92537 303 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 FBXL18Q96ME1 805 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 BLZF1Q9H2G9 400 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 FNIP2Q9P278 1114 aa28.73■■■□□ 2.19
CDK9-202ENST00000421939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.72■■■□□ 2.19
CDK9-202ENST00000421939 TRAPPC3O43617 180 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 ADRB2P07550 413 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 ACOT2P49753 483 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 FAM26FQ5R3K3 315 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 GRAMD1CQ8IYS0 662 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 GLIS3Q8NEA6 775 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 TMEM206Q9H813 350 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 GDPD2Q9HCC8 539 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 USP25Q9UHP3 1055 aa28.72■■■□□ 2.19
CDK9-202ENST00000421939 UBQLN1Q9UMX0 589 aaKnown RBP28.72■■■□□ 2.19
CDK9-202ENST00000421939 VWA8A3KMH1 1905 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 A0A1W2PQ27 194 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 A0A1W2PQ64 194 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 A0A1W2PQD8 194 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 GLUD1P00367 558 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 FGFR3P22607 806 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 CUL4BQ13620 913 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 PSMD5Q16401 504 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 PDXDC1Q6P996 788 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 CD302Q8IX05 232 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 FAM212AQ96EL1 285 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 TSPAN18Q96SJ8 248 aa28.71■■■□□ 2.19
CDK9-202ENST00000421939 POP1Q99575 1024 aaKnown RBP28.71■■■□□ 2.19
CDK9-202ENST00000421939 PLXNA3P51805 1871 aa28.7■■■□□ 2.19
CDK9-202ENST00000421939 FAM237AA0A1B0GTK4 181 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 I3L4J1 428 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 XPOTO43592 962 aaKnown RBP28.7■■■□□ 2.18
CDK9-202ENST00000421939 RPL17P18621 184 aaKnown RBP28.7■■■□□ 2.18
CDK9-202ENST00000421939 SYKP43405 635 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 BRCC3P46736 316 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 ITIH3Q06033 890 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 EHHADHQ08426 723 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 ZBTB6Q15916 424 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 RARS2Q5T160 578 aaKnown RBP28.7■■■□□ 2.18
CDK9-202ENST00000421939 CES5AQ6NT32 575 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 GJD3Q8N144 294 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 ADAM7Q9H2U9 754 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 SFXN1Q9H9B4 322 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 CD320Q9NPF0 282 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 NUB1Q9Y5A7 615 aa28.7■■■□□ 2.18
CDK9-202ENST00000421939 PVALEFA0A1B0GWK0 134 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 EIF3DO15371 548 aaKnown RBP eCLIP28.69■■■□□ 2.18
CDK9-202ENST00000421939 CYP3A5P20815 502 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 GARTP22102 1010 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 LRPAP1P30533 357 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 SSTR3P32745 418 aaPredicted RBP28.69■■■□□ 2.18
CDK9-202ENST00000421939 NDUFA8P51970 172 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 POU5F1Q01860 360 aaKnown RBP28.69■■■□□ 2.18
CDK9-202ENST00000421939 CBX2Q14781 532 aaPredicted RBP28.69■■■□□ 2.18
CDK9-202ENST00000421939 GLYCTKQ8IVS8 523 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 C12orf76Q8N812 135 aaPredicted RBP28.69■■■□□ 2.18
CDK9-202ENST00000421939 FSIP1Q8NA03 581 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 LNX1Q8TBB1 728 aaPredicted RBP28.69■■■□□ 2.18
CDK9-202ENST00000421939 PAGE5Q96GU1 130 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 MAN1C1Q9NR34 630 aa28.69■■■□□ 2.18
CDK9-202ENST00000421939 SPDYE4A6NLX3 237 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 TKTP29401 623 aaKnown RBP28.68■■■□□ 2.18
CDK9-202ENST00000421939 JADE1Q6IE81 842 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 ELMSAN1Q6PJG2 1045 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 CRELD2Q6UXH1 353 aaPredicted RBP28.68■■■□□ 2.18
CDK9-202ENST00000421939 EPM2AIP1Q7L775 607 aaPredicted RBP28.68■■■□□ 2.18
CDK9-202ENST00000421939 ASB7Q9H672 318 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 DPP7Q9UHL4 492 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 DERAQ9Y315 318 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 UBE4BO95155 1302 aa28.68■■■□□ 2.18
CDK9-202ENST00000421939 C19orf67A6NJJ6 358 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 C1RP00736 705 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 NFICP08651 508 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 TMEM132DQ14C87 1099 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 PALB2Q86YC2 1186 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 TMEM130Q8N3G9 435 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 BEST2Q8NFU1 509 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 CBWD1Q9BRT8 395 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 FAM213AQ9BRX8 229 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 PHF7Q9BWX1 381 aaPredicted RBP28.67■■■□□ 2.18
CDK9-202ENST00000421939 CDH22Q9UJ99 828 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 ANK1P16157 1881 aa28.67■■■□□ 2.18
CDK9-202ENST00000421939 MCM4P33991 863 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 GUCY2FP51841 1108 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 SPATA1Q5VX52 437 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 ARMCX5Q6P1M9 558 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 SAAL1Q96ER3 474 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 NECTIN4Q96NY8 510 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 CLSTN3Q9BQT9 956 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 GOLPH3LQ9H4A5 285 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 MTRRQ9UBK8 725 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 C2CD2Q9Y426 696 aa28.66■■■□□ 2.18
CDK9-202ENST00000421939 SYN3O14994 580 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 TGM5O43548 720 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 LDHAP00338 332 aaKnown RBP28.65■■■□□ 2.18
CDK9-202ENST00000421939 HOXD13P35453 343 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 KANK3Q6NY19 840 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 TMC5Q6UXY8 1006 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 ANKS3Q6ZW76 656 aa28.65■■■□□ 2.18
CDK9-202ENST00000421939 ZNF507Q8TCN5 953 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms