RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 NPEPPSP55786 919 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 PYROXD1Q8WU10 500 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ZBTB9Q96C00 473 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 KIFC3Q9BVG8 833 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 THG1LQ9NWX6 298 aaKnown RBP11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ATP11AP98196 1134 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 DCLK2Q8N568 766 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 NAGPAQ9UK23 515 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 DR1Q01658 176 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 GTF2H3Q13889 308 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ANKRD23Q86SG2 305 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ZFPM1Q8IX07 1006 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 RHOT1Q8IXI2 618 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 FTHL17Q9BXU8 183 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ENC1O14682 589 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 RHOBTB3O94955 611 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 ADCYAP1R1P41586 468 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 PIGHQ14442 188 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-206ENST00000421141 EDEM3Q9BZQ6 932 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 OLA1Q9NTK5 396 aaKnown RBP11.36□□□□□ -0.59
PTCH1-206ENST00000421141 NUP188Q5SRE5 1749 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 MYH15Q9Y2K3 1946 aa11.36□□□□□ -0.59
PTCH1-206ENST00000421141 AP3B1O00203 1094 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 PIK3R2O00459 728 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 KRT3P12035 628 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CDH6P55285 790 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CNTN2Q02246 1040 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 BRD3Q15059 726 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 GOLGA7BQ2TAP0 167 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 GLRA4Q5JXX5 417 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CEP85LQ5SZL2 805 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 C4orf19Q8IY42 314 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 NIF3L1Q9GZT8 377 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTCH1-206ENST00000421141 FAM50BQ9Y247 325 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 TRPV2Q9Y5S1 764 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ROR1Q01973 937 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CYP4F22Q6NT55 531 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 TRIM42Q8IWZ5 723 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 MKL1Q969V6 931 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 BCAP29Q9UHQ4 241 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
PTCH1-206ENST00000421141 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CYB561D2O14569 222 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ETF1P62495 437 aaKnown RBP11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CTXN3Q4LDR2 81 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 IL31Q6EBC2 164 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 DCUN1D1Q96GG9 259 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 DUOX1Q9NRD9 1551 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 FAM205CA6NFA0 338 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CYP26A1O43174 497 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 NCAM1P13591 858 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 BCAR1P56945 870 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 CCDC144BQ3MJ40 725 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 DCAF6Q58WW2 860 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 EFHC1Q5JVL4 640 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 RMDN1Q96DB5 314 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ABCF3Q9NUQ8 709 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 DNAJC6O75061 913 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 HMBSP08397 361 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 DPYDQ12882 1025 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ATPAF2Q8N5M1 289 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ASAP3Q8TDY4 903 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 PDE4DIPQ5VU43 2346 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 SLC11A2P49281 568 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 RASSF2P50749 326 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 GFPT1Q06210 699 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-206ENST00000421141 LAMB3Q13751 1172 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 ADGRF2Q8IZF7 708 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
PTCH1-206ENST00000421141 P4HA2O15460 535 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 TAF1BQ53T94 588 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ACRBPQ8NEB7 543 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 SLC7A14Q8TBB6 771 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 MCUR1Q96AQ8 359 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 PDCD2LQ9BRP1 358 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 MKNK1Q9BUB5 465 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 FAM49BQ9NUQ9 324 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 SLC1A1P43005 524 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ELF2Q15723 593 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 CDKL3Q8IVW4 592 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 C10orf67Q8IYJ2 551 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 FMO2Q99518 471 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 XYLBO75191 536 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 PALMO75781 387 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 HLA-DRAP01903 254 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 CDH18Q13634 790 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 TMTC4Q5T4D3 741 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 ANKRD42Q8N9B4 389 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 FBXO32Q969P5 355 aa11.34□□□□□ -0.59
PTCH1-206ENST00000421141 RNASEH1O60930 286 aaKnown RBP11.34□□□□□ -0.59
PTCH1-206ENST00000421141 RNF40O75150 1001 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms