RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SPATA32Q96LK8 384 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 ACCSQ96QU6 501 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 MAN1C1Q9NR34 630 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 TUBGCP4Q9UGJ1 667 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 KCNH3Q9ULD8 1083 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 EXOC7Q9UPT5 735 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 ATP6V1DQ9Y5K8 247 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 C2orf16Q68DN1 1984 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 LACTBL1A8MY62 500 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 TRAPPC3O43617 180 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 BRCC3P46736 316 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 SPAG1Q07617 926 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 PSMD5Q16401 504 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 PDXDC1Q6P996 788 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 KIF12Q96FN5 646 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 NECTIN4Q96NY8 510 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 TSPAN18Q96SJ8 248 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 C7orf25Q9BPX7 421 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 CLSTN3Q9BQT9 956 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 PYM1Q9BRP8 204 aaKnown RBP22.11■■□□□ 1.13
GTF3A-202ENST00000419181 AGO2Q9UKV8 859 aaKnown RBP22.11■■□□□ 1.13
GTF3A-202ENST00000419181 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.11■■□□□ 1.13
GTF3A-202ENST00000419181 DENND4AQ7Z401 1863 aa22.11■■□□□ 1.13
GTF3A-202ENST00000419181 I3L4J1 428 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 TGM5O43548 720 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 CYP3A5P20815 502 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 ACOT2P49753 483 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 ASIC1P78348 528 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 POSTNQ15063 836 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 LILRA6Q6PI73 481 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 TMC5Q6UXY8 1006 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 PALB2Q86YC2 1186 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 GLYCTKQ8IVS8 523 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 CD302Q8IX05 232 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 FEZF2Q8TBJ5 459 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 HDAC7Q8WUI4 952 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 POMGNT1Q8WZA1 660 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 RIPOR3Q96MK2 946 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 POMKQ9H5K3 350 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 DPP7Q9UHL4 492 aa22.1■■□□□ 1.13
GTF3A-202ENST00000419181 UBQLN1Q9UMX0 589 aaKnown RBP22.1■■□□□ 1.13
GTF3A-202ENST00000419181 SPDYE4A6NLX3 237 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 PI4K2BG5E9Z4 385 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 WEE2P0C1S8 567 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 CMA1P23946 247 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 TKTP29401 623 aaKnown RBP22.09■■□□□ 1.13
GTF3A-202ENST00000419181 LRPAP1P30533 357 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 MTHFRP42898 656 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 ELMSAN1Q6PJG2 1045 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 GPR149Q86SP6 731 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 GLIS3Q8NEA6 775 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 CMASQ8NFW8 434 aaPredicted RBP22.09■■□□□ 1.13
GTF3A-202ENST00000419181 HPS3Q969F9 1004 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 RPGRIP1Q96KN7 1286 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 MTRRQ9UBK8 725 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 NUB1Q9Y5A7 615 aa22.09■■□□□ 1.13
GTF3A-202ENST00000419181 PRPF6O94906 941 aaKnown RBP22.08■■□□□ 1.13
GTF3A-202ENST00000419181 SPATA31D3P0C874 917 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 POU5F1Q01860 360 aaKnown RBP22.08■■□□□ 1.13
GTF3A-202ENST00000419181 EHHADHQ08426 723 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 ATAT1Q5SQI0 421 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 CRELD2Q6UXH1 353 aaPredicted RBP22.08■■□□□ 1.13
GTF3A-202ENST00000419181 C15orf39Q6ZRI6 1047 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 SPATA31D4Q6ZUB0 917 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 TMEM130Q8N3G9 435 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 SCAND2PQ9GZW5 306 aaPredicted RBP22.08■■□□□ 1.13
GTF3A-202ENST00000419181 PLEKHA4Q9H4M7 779 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 TMEM206Q9H813 350 aa22.08■■□□□ 1.13
GTF3A-202ENST00000419181 SYN3O14994 580 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 ADAM12O43184 909 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 XPOTO43592 962 aaKnown RBP22.07■■□□□ 1.12
GTF3A-202ENST00000419181 ACTN4O43707 911 aaKnown RBP22.07■■□□□ 1.12
GTF3A-202ENST00000419181 PAPLNO95428 1278 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 SLFN14P0C7P3 912 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 ALADP13716 330 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 PFKFB1P16118 471 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 COL9A1P20849 921 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 CASP1P29466 404 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 TMEM31Q5JXX7 168 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 SPATA1Q5VX52 437 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 JADE1Q6IE81 842 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 ANKS3Q6ZW76 656 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 STXBP4Q6ZWJ1 553 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 UNC13DQ70J99 1090 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 RNF135Q8IUD6 432 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 SYCP3Q8IZU3 236 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 FAM212AQ96EL1 285 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 SUSD3Q96L08 255 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 BLZF1Q9H2G9 400 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 ASB7Q9H672 318 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 SERTAD1Q9UHV2 236 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 HPSEQ9Y251 543 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 DERAQ9Y315 318 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 BACE2Q9Y5Z0 518 aa22.07■■□□□ 1.12
GTF3A-202ENST00000419181 A0A1B0GVL5 298 aa22.06■■□□□ 1.12
GTF3A-202ENST00000419181 EIF3DO15371 548 aaKnown RBP eCLIP22.06■■□□□ 1.12
GTF3A-202ENST00000419181 NFICP08651 508 aa22.06■■□□□ 1.12
GTF3A-202ENST00000419181 GARTP22102 1010 aa22.06■■□□□ 1.12
GTF3A-202ENST00000419181 MCM4P33991 863 aa22.06■■□□□ 1.12
GTF3A-202ENST00000419181 AFMP43652 599 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms